Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr7g0104 ATGTCTAACTCTGACGGAGCAACTAACGGCGTCAGCAGCAACGGCGCAATCGTCGAGTCGCAGCGGAACAGCCAGCAGTCAAACGCCCTAGCCGTGAAAAAACCGCCGTCGAAGGACCGTCACAGCAAGGTCGACGGAAGAGGACGCCGCATTCGGATGCCGATCATATGCGCCGCACGTGTTTTCCAGCTGACACGTGAGTTAGGGCACAAGTCCGACGGTCAAACCATCGAGTGGCTTCTCCGGCAAGCTGAACCCTCCATCATCGCCGCAACCGGCACCGGCACGACTCCGGCGAGCTTCTCCACTGTCTCCGACCACAAGCCACTGCTTCCTCCTCCCACTCCCTTCATTCTCGGAAAACGCATACGCCCGGACGACGACGCAGCCGCCAAAGACGACGCCGTTTCGCTCGTTGGGTCTCCCACGCCGCACGCTCTTTGGGCCCTTCCTTCCAGGCCCGATTTCGGCCAAGTCTGGAGCTTCGCCGCCGCCGCCGCAGCCGCAGCGCCACCGGAACTCGTTTCGGTGTCGACGCAACAGCATGGTTCGATGTTCCACCAACATCACCATCAGCAACAGCAGCAGCAACAAGCCGCCATGGGAGAGGCTTCTGCGGCGAGGCTGGGGAATTACCTTCCCGGTCATCTGAATTTGCTGGCGTCGTTGTCCGGCGGCCACGGGAATTCCGGCCGGCGAGACGACGAGCCTCGTTGA 717 0.6179 MSNSDGATNGVSSNGAIVESQRNSQQSNALAVKKPPSKDRHSKVDGRGRRIRMPIICAARVFQLTRELGHKSDGQTIEWLLRQAEPSIIAATGTGTTPASFSTVSDHKPLLPPPTPFILGKRIRPDDDAAAKDDAVSLVGSPTPHALWALPSRPDFGQVWSFAAAAAAAAPPELVSVSTQQHGSMFHQHHHQQQQQQQAAMGEASAARLGNYLPGHLNLLASLSGGHGNSGRRDDEPR* 239
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr7g0104 238 ProSiteProfiles TCP domain profile. 37 91 IPR017887 -
Apr7g0104 238 MobiDBLite consensus disorder prediction 34 49 - -
Apr7g0104 238 PANTHER TRANSCRIPTION FACTOR TCP4-RELATED 1 235 IPR005333 GO:0003700
Apr7g0104 238 MobiDBLite consensus disorder prediction 1 32 - -
Apr7g0104 238 MobiDBLite consensus disorder prediction 1 49 - -
Apr7g0104 238 Pfam TCP family transcription factor 37 107 IPR017887 -
Apr7g0104 238 PANTHER TRANSCRIPTION FACTOR TCP FAMILY-RELATED 1 235 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr7g0104 Apr-Chr7 3981516 3984565 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr7g0104 11 238 TCP Transcription Factor Family AT5G23280 62.400 8.49e-91 266
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF TCP Apr7g0104 TCP 1.9e-30 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr7g0104 K16221 - gmx:100795254 350.517