Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr7g0101 ATGACTTCGTTGAATTTCAGTGGTCTGTGGAAGCCAATTTTTGTGATGATTATAGTCAATTTAGCTCTGGCTTTTGTCAACATATTACTGAAGAAGGTTCTTAACGAAGGAATGGACTACTTGACAATCCTAACATATCGACAGGCAATTTCAGCCATATTCTTGGCTCCTATTGCTTGCTTCTATGAAAGGAAAAGGAAGCTGGAGGGTCGCATAATATGTCTCCTTTTCCTAAGTGCTCTTGTGGGGGTAACACTCACTCAATACCTCTATCTCACTGGACTTGAATATACATCTGCCACATTCTCATGTGCATTCCTTAACATGGTACCTGTATTCACGTTCATTATGGCGGTTCCATTGGGGATAGAGAAGGTGAATATGAAAAGCATGAGTGCTAAGGCAAAGGTCTTGGGAACCATTGTGTGTATTGGTGGAGCTTTGTTGTTGATCCTTTATAAGGGAATGCCCTTAATAAATGAACAACCTCGGCACATTGCAGACAAGGCATCGACAGCATCAGCCTCCAAGTTAAAGAAATGGATTATAGGTTCAGTGCTTCTAACTGCAGGATGCCTCTTGTGGTCTTCCTGGTTTCTTATACAAGCAAGGATTAGCAAAAAGTATCCGTGCCAATACTCTAGCACAGCCATTTTGTCATTTTTTGCTGCCATTCAATCAGCAATATTAACTTTGGTCATCGATAGAAACCATACCAAATGGATTCTCAAAGGAAAGATAGAGATAATGACTGTTGTATATGCTGGGCTGGTGGGATCTGGCTTGTGCTATGTGGCAATGTCATGGTGTGTCAAACAAAGGGGTCCAGTTTTCACTTCAGCATTTACCCCTCTTCTGCAGATGTTTGTGGCCGTACTTGATTTCTCTATATTGCAGGAGGAAATTTATCTGGGAAGTGTTGCAGGATCAGTATTGGTTATTTCTGGCACTTATATTCTCTTATGGGGTAAAAGTAAAGAGGGAGAACAATGTTCCGTGAAGGATACTCAAGAAAATCAAGAAGACGAAGAATGTGGGAATAATTTTGAGAGCACTTCAAATGAGCCCTCTAAGCCGCCTAATGGGGAGCAAGGGTTCTCTGAATTACAAGTGAAACAATTAGCTGTTACAGTAATGACTAAAAGTCGATAA 1152 0.4089 MTSLNFSGLWKPIFVMIIVNLALAFVNILLKKVLNEGMDYLTILTYRQAISAIFLAPIACFYERKRKLEGRIICLLFLSALVGVTLTQYLYLTGLEYTSATFSCAFLNMVPVFTFIMAVPLGIEKVNMKSMSAKAKVLGTIVCIGGALLLILYKGMPLINEQPRHIADKASTASASKLKKWIIGSVLLTAGCLLWSSWFLIQARISKKYPCQYSSTAILSFFAAIQSAILTLVIDRNHTKWILKGKIEIMTVVYAGLVGSGLCYVAMSWCVKQRGPVFTSAFTPLLQMFVAVLDFSILQEEIYLGSVAGSVLVISGTYILLWGKSKEGEQCSVKDTQENQEDEECGNNFESTSNEPSKPPNGEQGFSELQVKQLAVTVMTKSR* 384
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr7g0101 383 MobiDBLite consensus disorder prediction 346 366 - -
Apr7g0101 383 PANTHER WAT1-RELATED PROTEIN 10 347 IPR030184 GO:0016021|GO:0022857
Apr7g0101 383 Pfam EamA-like transporter family 11 151 IPR000620 GO:0016020|GO:0016021
Apr7g0101 383 Pfam EamA-like transporter family 183 321 IPR000620 GO:0016020|GO:0016021
Apr7g0101 383 PANTHER WAT1-RELATED PROTEIN 10 347 - -
Apr7g0101 383 MobiDBLite consensus disorder prediction 332 366 - -
Apr7g0101 383 SUPERFAMILY Multidrug resistance efflux transporter EmrE 246 326 - -
Apr7g0101 383 SUPERFAMILY Multidrug resistance efflux transporter EmrE 46 154 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr7g0101 Apr-Chr7 3927625 3930245 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr7g0101 10 329 Nodulin-like Gene Family AT1G11460 41.796 6.21e-84 257
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr7g0101 - - gmx:100794199 645.58