Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr7g0088 ATGAGTTCTGATTCCAAACAGAACAAGCCTTCCGCAGAGGTAGCAAAGGTCGATGATGTTTATCTCTCTGCTTTAGTACTAAGTTTCAGTCGAGTCTTCCCTGCAATTCTAAATGCTGCTATTGATCTCAATTTGTTTGATATCATAGCAAAGGTACAAAGGTCACGTGATTCAAGCGTGTCTGCCTCTGAGATTGCTTCTCTGTTTCCAAATCCACACACAGAATTGGCTAAAAGGCTTGACCGCATATTGCCTCTGCTAGCTAGTTATTCTCTTCTGAGTTGTTCCATTCGCACCAATGAAGATGGTAAGAGAGAAAGGGTTTATCTGCTCTCACCCGTTGGGGAATACTTTTCACATCTCCATGATGGACACTCTTTGGCTCCTCTCTCAACCTTAAAACACCACGGATTTCATGACCTTTGGAAAAATGTGAAGGATGCAATTTTGGACCCTAATTGCAATACACATTTTGAAAGTGTCTATGGAATGCCTGCGTATGAATATATGGAGACAAACGAGGAGATGAATAAATATTTTTACGAAGCAATGAACTACTCTGCCCCGTTAGATGTGAAAAGGGTACTGACAATATATAAAGGGTTTGAGGGAGTGTCAACGTTGGTTGATGTAGGAGGGTCAACAGGGCAGACCCTAAAACAGATTATATCTGCTTATCCTTCAATCAAAGGAATTAATTTTGACTTGCCTCAGATGATTCAAGGGGCAAGTCCTTTTCCAGGGATAGAGCATGTTGGAGGAGATATGTTTGAAAGTGTTCCACAAGGTGATGCAATTATACTAAAGCTTGTATGTCATAATTGGCCAGATGAAGATTGCATAAAATTTTTAAGAAATTGCCACAAAGCTTTGCCGCAGCATGGAAAGGTGATTGTTCTGGATTTTATAATGCCAGAAGTTCCAAACTCAAGCAACATATCTAAGCATATTTGTGCCATCGACAATCTCATGTTTTTAGCACACGATGGAAAGGAAAGAACTGAGAATGAATTTCGGAACTTGTGCAAGAGTTCTGGTTTTTCCAAATTTCATATTGCATCCACTGACCGCACAGCTATGACAGGAGTGATGGAATTTTATAAGTAG 1107 0.4011 MSSDSKQNKPSAEVAKVDDVYLSALVLSFSRVFPAILNAAIDLNLFDIIAKVQRSRDSSVSASEIASLFPNPHTELAKRLDRILPLLASYSLLSCSIRTNEDGKRERVYLLSPVGEYFSHLHDGHSLAPLSTLKHHGFHDLWKNVKDAILDPNCNTHFESVYGMPAYEYMETNEEMNKYFYEAMNYSAPLDVKRVLTIYKGFEGVSTLVDVGGSTGQTLKQIISAYPSIKGINFDLPQMIQGASPFPGIEHVGGDMFESVPQGDAIILKLVCHNWPDEDCIKFLRNCHKALPQHGKVIVLDFIMPEVPNSSNISKHICAIDNLMFLAHDGKERTENEFRNLCKSSGFSKFHIASTDRTAMTGVMEFYK* 369
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr7g0088 368 Gene3D Vaccinia Virus protein VP39 121 368 IPR029063 -
Apr7g0088 368 PANTHER O-METHYLTRANSFERASE 1 368 IPR016461 GO:0008168
Apr7g0088 368 Pfam Dimerisation domain 36 88 IPR012967 GO:0046983
Apr7g0088 368 Gene3D - 1 118 IPR036388 -
Apr7g0088 368 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 25 368 IPR016461 GO:0008168
Apr7g0088 368 PANTHER CAFFEIC ACID O-METHYLTRANSFERASE 1 368 - -
Apr7g0088 368 CDD AdoMet_MTases 207 304 - -
Apr7g0088 368 SUPERFAMILY "Winged helix" DNA-binding domain 20 119 IPR036390 -
Apr7g0088 368 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 136 356 IPR029063 -
Apr7g0088 368 Pfam O-methyltransferase domain 142 348 IPR001077 GO:0008171
Apr7g0088 368 PIRSF O-mtase 1 368 IPR016461 GO:0008168
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr7g0088 Apr-Chr7 3662561 3663938 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr7g0088 18 352 Monolignol Biosynthesis Gene Families AT5G54160 47.041 5.40e-102 304
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr7g0088 - - aprc:113869089 667.537