Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr7g0084 ATGATTATTCTGTTGAATGCACAGGCTGGTCAACTCAGCTTTGTAGTGGGATCTCATGTTTGGGTTGAGGACACTGATTTAGCCTGGATAGATGGAGAGATCCAGGAATCTAAAGATGCAGAGATAACAGTTAACTTTGAATCGGGCACGAGGGTGGTGAGTAAATCATCTAACATCTATCCCAAAGATCCTGAATTCCCCCCCGACGGTGTAGAAGATATGACAAGGTTGGCATATCTTCATGAACCAGGAGTACTTCAAAATTTGCAAATTCGATATACCATAAATGAAATTTATACTTACACGGGAAATATATTGATAGCAGTGAACCCTTTTCAAAGGTTACCTCATTTGACTGAACATAGTACCATGGCAAAGTATAAAGGTGCAGCTTTTGGCGAGCAGAGCCCACATCCTTTTGCAATTGCAAGTTATGCATATAGGAAGATGATAAACGAAGGAACAAGTCAATCTATTTTGGTTAGTGGAGAAAGTGGAGCTGGTAAAACTGAAAGTACGAAGATGCTTATGCATTATCTTGCCTTTTTGGGAGGGAGAGCAGCAACTGAAGGACGGTCTGTGGAGCAACAAGTTCTAGAGTCCAATCCTGTTTTGGAAGCATTTGGCAATGCAAAGACTGTTAGAAACAATAATTCAAGTCGTTTTGGTAAGTTTGTGGAGATTCAGTTTGATCAAAAGGGGAGAATTTCAGGAGCTGCTATCAGAACTTATTTGCTGGAACGATCCCGTGTTTGTCAAGTTTCTGATCCTGAGAGAAATTATCATTGCTTTTATATGCTTTGTGCTGCATCACAAGAGAACGTTGATAGGTACAAATTGGGAAACCCAAGGACATTTCATTACCTTAATCAATCAAATTGCATTGAACTGGATGGGGTCGATGATTCTAAGGAGTACCATGCAACTAGGAGAGCTATGGAGGTTGTTGGGATCAGCTCTGATGAGCAAGATGCTATATTTCGAATAGTAGCTGCTGTACTTCATTTAGGAAACATTGAATTTATTAAGGGAGAGGAGGACGAGATGGATTCCTCTCAACCCAAAGATGAACAATCCCGTTTCCACCTAAAAACTGCAGCTGAGCTTTTTATGTGTGATGAGAAGTCCCTTGAAGACTCTTTCTGCAAACGTGTTATGGTGACTCGTGGTGAGGCCATAACAAAATCACTTGATCCAACTTCTGCAGCTCTCAGTAGGGATGCATTGGCTAAAATAGTTTATTCAAGGCTTTTTGACTGGATCGTGGACAAGATTAACAACTCTATTGGGCAAGATCCAGATTCAAAGAACTTGATTGGCGTTCTAGATATATATGGATTTGAGAGTTTCAAGACAAACAGCTTTGAGCAATTTTGTATCAATTTAACAAATGAGAAATTACAGCAACATTTCAACCAGCATGTATTCAAAATGGAGCAAGAGGAATATACAAAGGAAGAGATTGATTGGAGCTATATAGAGTTCGTTGATAATCAAGATGTTCTTGATCTCATAGAGAAGAAACCTGGTGGTGTTATAGCTCTCCTGGATGAGGCCTGTATGTTTCCAAGATCAACGCATGAAACATTTGCTGAAAAGCTTTACCAAACATTTAAAGACAATAAACGATTTAGCAAGCCAAAGTTGTCTCGCACTGATTTCACCATTAACCACTATGCTGGTGATGTCACTTATCAAACTGATCTTTTCCTTGACAAAAATAAAGACTATGTTGTTCCAGAGCATGCTGCCCTACTCAGTGCTTCCAAGTGCCCATTCGTTTCAGGGCTGTTCCCACCTTTACCTGAGGAAACTACTAAATCAACAAAGTTCTCTTCTATAGCCACTCAGTTTAAGCTACAACTGCAAACTTTGCTTGAAACACTGAATGCTACCGAACCACACTACATTCGTTGTGTAAAGCCAAATAATCTTCTTAAGCCAGGGATATTTGAGAACAACAATGTGTTGCAGCAACTTCGATGTGGAGGAGTAATGGAGGCAATTCGAATAAGTTGTGCTGGTTATCCTACTAGAAAGAACTTTGATGAATTTGTTCAGCGGTTCAGTATCCTAGAACCTAAGGTTCTGGAAGAATGCCCTGAAGAGATGAATGCTTGCAAGAGGATTCTAGATAAATCAAACCTTAAAAAAGATTATCAGATTGGAAAGACGAAAGTGTTTCTTAGAGCAGGTCAAATGGCAGAACTAGATGCATGTCGTGCTGAGGTCTTGGGAAGATCTGCAACCATTATCCAGAGAAAAGTCCTCACATTTCTTTGTCAGAAACACTACATTCTACTGCAGTTGTCTGCCACAGAACTTCAAAGGGTTGCTAGAGGACAACTTGCACGACATCAGTATGAATGCATGAGGAGGGAAGCTGCTTCTTTGAAAATCCAGAGACATTTCCGCATGCATCTTTCCAGAAATGCTTACAAAACTATTTATGCCACAGCTATTTATATTCAAACTGGTATGCGTGGGATGGCTGCTAGAAATGACCTTAGATTCAGGAGAAGGACCCAAGCTGCAATTGTTATTCAGGGTCACCGCAGAGGTTATTTAGCCCGTACTTATTTCAAAAGGTTAAAAAAAGCAACAATATCGGTCCAATGTTCCTGGAGGAGAACAAGGGCGCGTAGAGAACTTCGAAAGCTTAAAATGGCTGCCAAGGAAGCCAAGGCTCTTGAAGCTGCCAAAATTAATCTTGAAAAGCAAGTCGAAGAATTAACTTTGTGTCTAGAAACAGAGAAGAGAATGAGGATGGAGCTTCAGTTCCAAGAAATTAAGGAATCCAAGACACAGGAAAATGAAAAACTACAACAAGCTTTGCAAGAGATGGAGCTTCAATTTGAAGAAACTAAGGCAGTCAAGACAAAAGAAAATGAAAAACTACAACAAGCTTTGCAAGAGATGGAGCTTCAGTTCCAAGAAACTAAGGCAGCGCTCATTCAGGAACGTGATGCTGCTAAGCAAGTAGCTGAGAATGCTCCAACTATACCGGAGACTTCTATTAATGCTGTTGACAATGAATTGATCAATAAGCTTACTTCAGAAAATGAACAACTTAAGGAACTGGTTAATTCATCGGAAAAGAAAGCTGCACAGGAGCTTCCTGTCAATGTTACTGACAATGAATTGATCAATAAGCTTACTTCAGAAAATGAACAACTCAAGGAGCTGGTAATTTCATTGGAAAAGAAAACTGCACAGGAACTTCCTGTCAATGTTGACAGTGAATTAATCAATAAGCTTACTGCAGAAAATGAACAAGTCAAGGAACTGGTTGATTCATTGGAAAAGAAAGCTGCACAGGAGCTTCCTGTCAATGTTACTGACAATGAATTGATCAATAAGCTTAATGCAGAAAATGAACATCTTAAGGACCAGGTTAATTCATTGGAAAGAAAAATTGATGAAACAGAAAGGAAATATGAAGAATGTAACAGGCTTAGTGAAGAGCGCATGAATCAAATTATAGAGACAGAATCAAAAATAATTGACATAAAGACAAATATGCAGAAGCTTGAAGAAAAATTGTCAGATATGGAAACTGAGAATCAAATTTTGCGGCAGCAAGCCTTGTTGAGTTCGTCGTCCAGGAGAATGTCAGGAAAATTTTCACCTGCTACTACTACGGCGTTGGAAAATGGTCAGCAGGCACCGCAGAGTTCTGCACCAGCAAAAACATTTGGTTCAGAGGCTGATAGTAAACTAAGGAGATCTATTATGGAGAGGCATCAGGAGAGTGTAGATATTCTTTTCAAATGTGTGACAAAAGATCTTGGGTTCTCTGAAGGAAAACCTGTTGCAGCATTTACCCTTTATAATTGTCTGCTACATTGGAAATCTTTTGAAGCAGAAAAGACGAGCATATTTGATCGCCTTATTCAGCTGATTGGTTCTGAAATAGAGGATCAGGACAATAATGATTGTATGGTATATTGGTTATCCAACACATCTGCTTTGTTTTTCCATCTTCAGCAATGTCTTAGAGTACCTACAGCACGAAAACCACCCACTCCAACATCTTTTTTTGGGAGGGTGGCCCAGGGTTTCCGCTCATCTAATAGTCTTTCCAGCAGTGCATTCGATGTTGTAAATCAGGTTGATGCCAAGTATCCAGCTTTGCTTTTCAAGCAGCAGCTTGCAGCTTATGTGGAAAAGATATATGGAATCATTCGAGAAAACTTTAAGAAAGACTTGTCACCCCTGCTTTCTTCCTGCATTAAGGCGGATGGAACATCAAATGACAACAGTCAACCTACTACTTCTTGGCTCAGCATTATTGAATGCCTAAATAGATTTCTCAAGATTCTGAAAGAAAATTATGTGACTCCTGTTCTAGTTCATAAGCTTTTTAGTCAAATTTTACAATACATCAATGCAGAGCTCTTTAATAGCCTTCTATTAAATCGAGAATGCTGCACTTTCAAAAATGGAGAATATATAAAATCAGGGCTGGATCAACTAGAACAATGGGGCAATGAAGCAACAGAAGAGTGCATTGGCTCATCTTTGGATGAACTCAAAAACGCAACGCAAGCAGTTGGATTCTTGGTTGCACAACAGAAGGATGGACTGTCTTATGATGATCTTACAAATGACCTCTGCCCTGTCCTGAGTGCTCAGCAGCTTTATAGAATATGTACATTTTATTGTGATGAAAAAGACAATACTCAAAGTGTATCGTCAGATGTCACTTCTAGATTGAAGCTTCTAATGACAGATGATGAAAATGAAGACGACAAATCTTTCTTGTTGGAAGACAATTCAAGTCTTCCTATTATCGTTGAAGAGATTCCTACTTCCCTTCAAGATAAGACCATGCCAAAAGTAAAACCTCCTGCAGAACTTCTTGAGAATGCAAACTTCCAATTTTTGCATGATTATTGTTAG 4902 0.3931 MIILLNAQAGQLSFVVGSHVWVEDTDLAWIDGEIQESKDAEITVNFESGTRVVSKSSNIYPKDPEFPPDGVEDMTRLAYLHEPGVLQNLQIRYTINEIYTYTGNILIAVNPFQRLPHLTEHSTMAKYKGAAFGEQSPHPFAIASYAYRKMINEGTSQSILVSGESGAGKTESTKMLMHYLAFLGGRAATEGRSVEQQVLESNPVLEAFGNAKTVRNNNSSRFGKFVEIQFDQKGRISGAAIRTYLLERSRVCQVSDPERNYHCFYMLCAASQENVDRYKLGNPRTFHYLNQSNCIELDGVDDSKEYHATRRAMEVVGISSDEQDAIFRIVAAVLHLGNIEFIKGEEDEMDSSQPKDEQSRFHLKTAAELFMCDEKSLEDSFCKRVMVTRGEAITKSLDPTSAALSRDALAKIVYSRLFDWIVDKINNSIGQDPDSKNLIGVLDIYGFESFKTNSFEQFCINLTNEKLQQHFNQHVFKMEQEEYTKEEIDWSYIEFVDNQDVLDLIEKKPGGVIALLDEACMFPRSTHETFAEKLYQTFKDNKRFSKPKLSRTDFTINHYAGDVTYQTDLFLDKNKDYVVPEHAALLSASKCPFVSGLFPPLPEETTKSTKFSSIATQFKLQLQTLLETLNATEPHYIRCVKPNNLLKPGIFENNNVLQQLRCGGVMEAIRISCAGYPTRKNFDEFVQRFSILEPKVLEECPEEMNACKRILDKSNLKKDYQIGKTKVFLRAGQMAELDACRAEVLGRSATIIQRKVLTFLCQKHYILLQLSATELQRVARGQLARHQYECMRREAASLKIQRHFRMHLSRNAYKTIYATAIYIQTGMRGMAARNDLRFRRRTQAAIVIQGHRRGYLARTYFKRLKKATISVQCSWRRTRARRELRKLKMAAKEAKALEAAKINLEKQVEELTLCLETEKRMRMELQFQEIKESKTQENEKLQQALQEMELQFEETKAVKTKENEKLQQALQEMELQFQETKAALIQERDAAKQVAENAPTIPETSINAVDNELINKLTSENEQLKELVNSSEKKAAQELPVNVTDNELINKLTSENEQLKELVISLEKKTAQELPVNVDSELINKLTAENEQVKELVDSLEKKAAQELPVNVTDNELINKLNAENEHLKDQVNSLERKIDETERKYEECNRLSEERMNQIIETESKIIDIKTNMQKLEEKLSDMETENQILRQQALLSSSSRRMSGKFSPATTTALENGQQAPQSSAPAKTFGSEADSKLRRSIMERHQESVDILFKCVTKDLGFSEGKPVAAFTLYNCLLHWKSFEAEKTSIFDRLIQLIGSEIEDQDNNDCMVYWLSNTSALFFHLQQCLRVPTARKPPTPTSFFGRVAQGFRSSNSLSSSAFDVVNQVDAKYPALLFKQQLAAYVEKIYGIIRENFKKDLSPLLSSCIKADGTSNDNSQPTTSWLSIIECLNRFLKILKENYVTPVLVHKLFSQILQYINAELFNSLLLNRECCTFKNGEYIKSGLDQLEQWGNEATEECIGSSLDELKNATQAVGFLVAQQKDGLSYDDLTNDLCPVLSAQQLYRICTFYCDEKDNTQSVSSDVTSRLKLLMTDDENEDDKSFLLEDNSSLPIIVEEIPTSLQDKTMPKVKPPAELLENANFQFLHDYC* 1634
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr7g0084 1633 Coils Coil 1014 1034 - -
Apr7g0084 1633 SMART MYSc_2a 63 743 IPR001609 GO:0003774|GO:0005524|GO:0016459
Apr7g0084 1633 Gene3D - 676 740 - -
Apr7g0084 1633 Coils Coil 877 914 - -
Apr7g0084 1633 Coils Coil 1083 1103 - -
Apr7g0084 1633 CDD MyosinXI_CBD 1246 1600 IPR037975 GO:0007015
Apr7g0084 1633 Gene3D Kinesin motor domain 72 671 IPR036961 -
Apr7g0084 1633 Gene3D - 745 795 - -
Apr7g0084 1633 Gene3D - 796 842 - -
Apr7g0084 1633 Gene3D - 843 893 - -
Apr7g0084 1633 PRINTS Myosin heavy chain signature 99 118 IPR001609 GO:0003774|GO:0005524|GO:0016459
Apr7g0084 1633 PRINTS Myosin heavy chain signature 156 181 IPR001609 GO:0003774|GO:0005524|GO:0016459
Apr7g0084 1633 PRINTS Myosin heavy chain signature 203 230 IPR001609 GO:0003774|GO:0005524|GO:0016459
Apr7g0084 1633 PRINTS Myosin heavy chain signature 438 466 IPR001609 GO:0003774|GO:0005524|GO:0016459
Apr7g0084 1633 PRINTS Myosin heavy chain signature 491 519 IPR001609 GO:0003774|GO:0005524|GO:0016459
Apr7g0084 1633 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 43 796 IPR027417 -
Apr7g0084 1633 ProSiteProfiles Dilute domain profile. 1295 1578 IPR002710 -
Apr7g0084 1633 ProSiteProfiles Myosin N-terminal SH3-like domain profile. 15 64 IPR004009 GO:0003774|GO:0005524|GO:0016459
Apr7g0084 1633 ProSiteProfiles IQ motif profile. 793 819 IPR000048 GO:0005515
Apr7g0084 1633 PANTHER MYOSIN 12 1630 - -
Apr7g0084 1633 SMART iq_5 767 789 IPR000048 GO:0005515
Apr7g0084 1633 SMART iq_5 792 814 IPR000048 GO:0005515
Apr7g0084 1633 SMART iq_5 744 766 IPR000048 GO:0005515
Apr7g0084 1633 SMART iq_5 840 862 IPR000048 GO:0005515
Apr7g0084 1633 SMART iq_5 863 885 IPR000048 GO:0005515
Apr7g0084 1633 SMART iq_5 815 837 IPR000048 GO:0005515
Apr7g0084 1633 Pfam Myosin N-terminal SH3-like domain 17 58 IPR004009 GO:0003774|GO:0005524|GO:0016459
Apr7g0084 1633 Gene3D Myosin VI head, motor domain, U50 subdomain 319 610 - -
Apr7g0084 1633 ProSiteProfiles IQ motif profile. 818 845 IPR000048 GO:0005515
Apr7g0084 1633 Pfam IQ calmodulin-binding motif 842 862 IPR000048 GO:0005515
Apr7g0084 1633 Pfam IQ calmodulin-binding motif 795 814 IPR000048 GO:0005515
Apr7g0084 1633 Pfam IQ calmodulin-binding motif 771 788 IPR000048 GO:0005515
Apr7g0084 1633 Pfam Myosin head (motor domain) 71 730 IPR001609 GO:0003774|GO:0005524|GO:0016459
Apr7g0084 1633 ProSiteProfiles Myosin motor domain profile. 69 742 IPR001609 GO:0003774|GO:0005524|GO:0016459
Apr7g0084 1633 ProSiteProfiles IQ motif profile. 768 797 IPR000048 GO:0005515
Apr7g0084 1633 PANTHER MYOSIN HEAVY CHAIN 12 1630 - -
Apr7g0084 1633 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 795 892 IPR027417 -
Apr7g0084 1633 CDD MYSc_Myo11 83 730 IPR036018 -
Apr7g0084 1633 Gene3D - 448 632 - -
Apr7g0084 1633 Pfam DIL domain 1454 1555 IPR002710 -
Apr7g0084 1633 Coils Coil 1049 1069 - -
Apr7g0084 1633 Coils Coil 1111 1194 - -
Apr7g0084 1633 SMART DIL_2 1453 1560 IPR002710 -
Apr7g0084 1633 ProSiteProfiles IQ motif profile. 864 893 IPR000048 GO:0005515
Apr7g0084 1633 Coils Coil 927 990 - -
Apr7g0084 1633 ProSiteProfiles IQ motif profile. 841 870 IPR000048 GO:0005515
Apr7g0084 1633 Gene3D - 259 317 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr7g0084 Apr-Chr7 3474457 3503905 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr7g0084 1417 1631 Myosins gene family AT1G04600 52.093 1.46e-57 218
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr7g0084 K10357 - gmx:100788123 2573.12