Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr7g0068 ATGGCTGCGCCGTCGCATTCGAGCGGCGACGCTTGCACCGCTGAATTTCCGGTGGGTCTCCGCGTTCTCCTCGTCGACGATGACGCTGCCACTTTGAAGATTATCGAGCAAATGTCTATTCGCTGCCGTTATCTCGTTACTGCATGCACTGAGGCTACTGTTGCTTTGAATCTTCTGCGGGAAAGGAAAGGTTGTTTTGATGTGGTACTGAGTGATGTTCATATGCCTGACATGGATGGCTATAAACTCCTTGAACATGTTGGGCTGGAAATGGACCTTCCTGTTATTATGATGTCTGCTGATAGTACAACAAGTGCTGTTATGAAGGGAATCAGACACGGGGCTTGTGATTATTTGATTAAGCCTGTACGTGAGGAAGAATTAAGGAATATATGGCAGCATGTTGTTAGGAAAATGTGGAATGAAAACAAAGAACATGATAATTCAGGCAGTGTGGAAGATAATGATAGGAATAAACGGGGGAATGATGATGCTGAATATACTTCTTCTGTTGCTGATGCAGCAGAAGTAGTTAAAATACCAAAAAAGAGAAGCAGTTTAAAAGAAGAAGATGATCTTGAATTGGAGACTGATGATCCTGCTACATCTAAGAAGCCCCGTGTAGTGTGGTCAGTGGAGTTACATCAACAATTTGTTAGTGCTGTTAATCAACTTGGGCTTGACAAGGCAGTGCCGAAGAGAATACTAGAATTGATGAATGTCCCGGGTTTGACAAGAGAAAATGTTGCAAGTCATTTACAGAAATTTAGACTTTATTTGAAGCGATTAAGTGGAGTGGCACAGCAACAGAATGGGATGCTAAACACAGTTCCTGGAACTATAGAGTCCAAGCTGGGTGCTCCTGGAAGATTGGACATACAAGCTTTGGCTGCTGCTGGTCATGTTCCCCCTGAAACACTTGCAGCCCTTCATGCTGAGCTCTTAGGTCGCCCAGCAACTAACATAATTACTACAGTGGACCAGACTGCCCTACTGCAAGCATCCATTCAGGGGCCAAAACATTCCCATGTTGAACATGCTGTGGCATATGGTCAGCCTCTTGTGAAGTGTCCTTCCAACATTGGCAAGAATTTTCCTCCATCTATCGTAACTGTAAATGATACATCATCAGGATATAGTGCATGGCCGTCATCTAATAATACAGTTGGTTTGGTGGGACCCAATAGTAACATTGAAAGGGTGGCTGTTCAGAACAATGTGCTGATGGATATATTACAGCAGCAACAAATGCAGCAGCACCAGCAAAAACAACAGCAACAAGTGCAGCAGCAGTCACTGGTACCTGATCAAAGTCATTCAATCAATGTTCAACCATCTTGCTTGGTGGTACCCTCTCAATCTTCAGAAACTTTCCAGGCAGTAAATCTTGCTTCTGTCAACCACGACTGCAGTTTTGGCAGGAATGCCATTATTGATTATAGTGTATTGTCACAAAAATCAAATAATCCATTGAGTGCATCTAAATTTCCTGGTGGGGACACCAAACCACAAGGTGTTCTCTGTGGGTATACTGCACCCTCCATTTGTTCCATGGGCTCCAGCAATAATAGCAATATTCAGCACCTTCAAAACTCAATTTTGACATTTGGTTCCACAAGACCTTTGCCTGGCCTTTTGCCCACGTCTGATAGACAAGATCCCTATGGTTTTAAATCAGGTGATTCACTTGATCAAGTATCTCTTAGGAGTATTGGATTTATTGGCAAAAGCACTTGTATTCCAAGTAGGTTTGTGGAAAATGGAACTGAATCATCTGTAAGTGATTTAAGTCAAATGAAACTAGATGGAAATAGCAGTGGCAACTCACTGAAGGAGGAACCAAATTTTATCAATATTCCAAAAGTGAGCTACCCAATCTTACAAAGATATCCATCTCAGTAA 1902 0.4259 MAAPSHSSGDACTAEFPVGLRVLLVDDDAATLKIIEQMSIRCRYLVTACTEATVALNLLRERKGCFDVVLSDVHMPDMDGYKLLEHVGLEMDLPVIMMSADSTTSAVMKGIRHGACDYLIKPVREEELRNIWQHVVRKMWNENKEHDNSGSVEDNDRNKRGNDDAEYTSSVADAAEVVKIPKKRSSLKEEDDLELETDDPATSKKPRVVWSVELHQQFVSAVNQLGLDKAVPKRILELMNVPGLTRENVASHLQKFRLYLKRLSGVAQQQNGMLNTVPGTIESKLGAPGRLDIQALAAAGHVPPETLAALHAELLGRPATNIITTVDQTALLQASIQGPKHSHVEHAVAYGQPLVKCPSNIGKNFPPSIVTVNDTSSGYSAWPSSNNTVGLVGPNSNIERVAVQNNVLMDILQQQQMQQHQQKQQQQVQQQSLVPDQSHSINVQPSCLVVPSQSSETFQAVNLASVNHDCSFGRNAIIDYSVLSQKSNNPLSASKFPGGDTKPQGVLCGYTAPSICSMGSSNNSNIQHLQNSILTFGSTRPLPGLLPTSDRQDPYGFKSGDSLDQVSLRSIGFIGKSTCIPSRFVENGTESSVSDLSQMKLDGNSSGNSLKEEPNFINIPKVSYPILQRYPSQ* 634
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr7g0068 633 MobiDBLite consensus disorder prediction 143 168 - -
Apr7g0068 633 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 205 258 IPR006447 GO:0003677
Apr7g0068 633 SMART REC_2 20 132 IPR001789 GO:0000160
Apr7g0068 633 MobiDBLite consensus disorder prediction 143 166 - -
Apr7g0068 633 Gene3D - 201 264 - -
Apr7g0068 633 Pfam Myb-like DNA-binding domain 207 255 IPR001005 -
Apr7g0068 633 Gene3D - 20 156 - -
Apr7g0068 633 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 202 261 IPR017930 -
Apr7g0068 633 PANTHER TWO-COMPONENT RESPONSE REGULATOR ARR14 15 463 - -
Apr7g0068 633 Pfam Response regulator receiver domain 22 131 IPR001789 GO:0000160
Apr7g0068 633 SUPERFAMILY Homeodomain-like 202 262 IPR009057 -
Apr7g0068 633 CDD REC_typeB_ARR-like 22 136 - -
Apr7g0068 633 PANTHER TWO-COMPONENT RESPONSE REGULATOR 15 463 IPR045279 GO:0009736
Apr7g0068 633 ProSiteProfiles Response regulatory domain profile. 21 136 IPR001789 GO:0000160
Apr7g0068 633 SUPERFAMILY CheY-like 19 143 IPR011006 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr7g0068 Apr-Chr7 2910794 2918890 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr7g0068 54 319 Response Regulator Gene Family AT3G16857 54.930 1.20e-92 297
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-ARR-B Apr7g0068 Response_reg 8.5e-21 CL0304
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr7g0068 - K14491 gmx:100817125 992.26