Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr7g0056 ATGGCATCCATGGAAGACATCAACATGAGTGGGGAAATTGCACTTCCTGGCTTCCGATTTCACCCCACAGAAGAAGAACTCCTCAATTTCTATCTTAAAAACATGGTTGTTGGCAAGAAACATCGTTTTGATGTCATTGGTTTCCTCAACATCTATCATCATGATCCTTGGGACTTGCCTGGTCTATCAAAGGTTGGGGAAAGAGAATGGTACTTCTTTGTGCCAAGGGACAAAAAGCATGGGAGTGGGGGAAGGCCTAACCGCACCACAGAAAAGGGGTTCTGGAAAGCCACCGGTTCAGACCGGAAAATTGTGACCTTATCTGATCCCAAGCGCATCATTGGGTTAAGGAAGACCTTAGTTTTCTATGAGGGAAGAGCTCCACGGGGATGCAAGACCGATTGGGTCATGAATGAGTACCGTTTACCTGACAATTGCAAATTACCAAAGGACACTGTGTTATGCAAGATATATAGAAAGGCAACTTCGTTGAAGGTGCTAGAGCAAAGGGCAGCAATTGAGGAAGAAATGAAGCAAATGGTGGGTTCCCCTGCGTCCCCTCCTTCCTCTACGGACACCATGTCCTTTAATAGCCCTCAGGAAGACCAAAACGTGCCCTTGCCCATGTTGCAACATGTCGTTCTTAAGAAAGAGTCGGAAACTGAAACTGAAGAAATGGCTTATGTCTCAGTGCCAAAGCAAGAAAAATTAAGGACCCAATTGCCTCTCAAAGATAACAAAACGACTTGTGGCACATCACTGCAATTGCCCTTAGGGAGGGACAAGCTGCCCGAACTGCAACTACCCATTTTCCCAGACTGGACTCAAGATACCTTTTGGGCTCAATTGAACAGTCCTTGGCTCCCAAACTTGACTCCTTACTCCAACATCATAAATTTCTGA 903 0.4574 MASMEDINMSGEIALPGFRFHPTEEELLNFYLKNMVVGKKHRFDVIGFLNIYHHDPWDLPGLSKVGEREWYFFVPRDKKHGSGGRPNRTTEKGFWKATGSDRKIVTLSDPKRIIGLRKTLVFYEGRAPRGCKTDWVMNEYRLPDNCKLPKDTVLCKIYRKATSLKVLEQRAAIEEEMKQMVGSPASPPSSTDTMSFNSPQEDQNVPLPMLQHVVLKKESETETEEMAYVSVPKQEKLRTQLPLKDNKTTCGTSLQLPLGRDKLPELQLPIFPDWTQDTFWAQLNSPWLPNLTPYSNIINF* 301
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr7g0056 300 MobiDBLite consensus disorder prediction 179 203 - -
Apr7g0056 300 PANTHER NAC DOMAIN-CONTAINING PROTEIN 82-RELATED 6 300 - -
Apr7g0056 300 PANTHER NAC TRANSCRIPTION FACTOR 29-LIKE 6 300 - -
Apr7g0056 300 SUPERFAMILY NAC domain 9 160 IPR036093 GO:0003677|GO:0006355
Apr7g0056 300 Gene3D NAC domain 23 164 IPR036093 GO:0003677|GO:0006355
Apr7g0056 300 Pfam No apical meristem (NAM) protein 16 142 IPR003441 GO:0003677|GO:0006355
Apr7g0056 300 ProSiteProfiles NAC domain profile. 14 160 IPR003441 GO:0003677|GO:0006355
Apr7g0056 300 MobiDBLite consensus disorder prediction 183 203 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr7g0056 Apr-Chr7 2065470 2067792 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr7g0056 9 297 NAC Transcription Factor Family AT2G17040 59.794 5.50e-119 341
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Apr7g0056 NAM 5.9e-34 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr7g0056 - - gmx:732555 513.842