Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr7g0055 ATGCTTCAAAGCTTGCTCCCCCGATCCCCCCTCACTTCCAACCCTAACGCCATGAAAACTAAGCGCTCCGACGCTGATTCCTCCGCCGACGAACCTTCCTTCAAGCGACACAACCTCTCCGGCGCCGACGAAGCTGATGAGGAACAGGCCTTCGAACCTGAAGCTCAAGGTGAGTCCACCGGTCTCAAACTCCTAGGGCTTTTGCTTCAGTGTGCCGAGTGCGTTGCCATGGACAACCTCGACTTCGCCAACGACCTCTTGCCTGAGATCGCCGAACTCTCCTCGCCGTTCGGGACGTCGCCAGAGCGCGTTGGCGCGTACTTCGCTCAGGCGCTGCAGGCCCGAGTGGTGAGTTCCTGCCTCGGTACGTACTCTCCGTTAACGGCCAAATCGGTAACCCTGACTCAGTCGCAGCGAATCTTCAACGCGTTTCAATCCTACAACTCGGTCTCGCCGCTGGTGAAGTTCTCGCACTTCACCGCGAACCAGGCCATCTTCCAGGCCCTGGAAGGCGAGGATCGCGTCCACATCATCGACCTGGACATCATGCAAGGCCTTCAATGGCCAGGATTGTTCCACATCCTCGCCTCTCGCTCCAAGAAGATCCGCTCCATGAGAATCACCGGGTTCGGAGCCTCCTCCGAGCTTCTGGAGTCCACAGGTCGGAGACTCGCCGACTTCGCGAGTTCGCTTGGGCTTCCCTTCGAGTTTCACCCGGTGGAAGGTAAAATCGGGAGCGTGAGTGAGGCGAGTCAACTCGGCGTTAGGCCGAACGAGGCGACAGTGGTGCACTGGATGCACCACTGCTTGTATGATATAACTGGCAGCGATTTAGGGACGTTGAGATTGCTGACTCAGCTTAGGCCGAAGCTTATCACGACCGTTGAACAGGATCTCAGCCACGCCGGGAGTTTCCTCGCGCGCTTCGTGGAGGCCTTGCATTATTACAGCGCGTTGTTCGACGCGCTCGGGGATGGGTTGGGTGTGGACAGCCTCGAGAGGCATACGGTGGAGCAGCAGTTATTGGGCTGCGAAATCAGAAATATTGTGGCAGTGGGGGGGCCCAAGAGAACGGGTGAGGTTAAGGTGGAGAGGTGGGGGGACGAGTTGAAACGGGTCGGGTTTCGACCGGTTTCTCTCCGGGGCAACCCGGCTGCACAGGCGAGTTTGTTGCTTGGAATGTTCCCTTGGAGAGGGTACACGCTTGTGGAAGAGAATGGTTCTCTGAAGCTTGGTTGGAAGGATCTTTCTCTGTTGATTGCTTCAGCTTGGCAACCCTCTGATTCGGTTGAAATCATTTGA 1302 0.5722 MLQSLLPRSPLTSNPNAMKTKRSDADSSADEPSFKRHNLSGADEADEEQAFEPEAQGESTGLKLLGLLLQCAECVAMDNLDFANDLLPEIAELSSPFGTSPERVGAYFAQALQARVVSSCLGTYSPLTAKSVTLTQSQRIFNAFQSYNSVSPLVKFSHFTANQAIFQALEGEDRVHIIDLDIMQGLQWPGLFHILASRSKKIRSMRITGFGASSELLESTGRRLADFASSLGLPFEFHPVEGKIGSVSEASQLGVRPNEATVVHWMHHCLYDITGSDLGTLRLLTQLRPKLITTVEQDLSHAGSFLARFVEALHYYSALFDALGDGLGVDSLERHTVEQQLLGCEIRNIVAVGGPKRTGEVKVERWGDELKRVGFRPVSLRGNPAAQASLLLGMFPWRGYTLVEENGSLKLGWKDLSLLIASAWQPSDSVEII* 434
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr7g0055 433 MobiDBLite consensus disorder prediction 1 56 - -
Apr7g0055 433 ProSiteProfiles GRAS family profile. 55 425 IPR005202 -
Apr7g0055 433 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 16 426 IPR005202 -
Apr7g0055 433 Pfam GRAS domain family 66 425 IPR005202 -
Apr7g0055 433 PANTHER SCARECROW-LIKE PROTEIN 23 16 426 - -
Apr7g0055 433 MobiDBLite consensus disorder prediction 1 22 - -
Apr7g0055 433 MobiDBLite consensus disorder prediction 23 44 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr7g0055 Apr-Chr7 2054425 2056546 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr7g0055 18 428 GRAS Transcription Factor Family AT5G41920 66.906 0.0 540
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Apr7g0055 GRAS 9.4e-114 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr7g0055 - - gmx:100816249 771.926