Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr7g0050 ATGGGATTTATGTTGGAAGAAGAAGGGTCGTCTTCTGTAACTTGTTCACCGCTGCAGCTCTTCTCCATGATGTCACTTTCACCTAGTTTAGGATCTCCCCATCTCTTGCTTAGAGAAATGAAATCTGAGCAAAGGGGTTTGTACTTGATCCATTTGTTGCTCACTTGTGCAAATCATGTAGCTGCTGGTAACCTTGAAAATGCAAATACCACACTTGAGCAAATTTCCCTGCTTGCTTCTCCTGATGGTGATACTATGCAGCGGATCACAGCATATTTTACCGAAGCACTCGCTGATCGGATACTTAAAACATGGCCTGGGATCCACAGAGCCCTCAACTCAACCAGAATGAGTATGCTTTCAGAAGAGTTTCTTGTTCAGAAGCTCTTCTTTGAGCTTTTCCCTTTCTTGAAGGTAGCATTTGTTCTCACAAACCAGGCTATTGTTGAAGCAATGGAAGGGGAGAAAATTATTCATATAATTGATCTAAATGCTGCTGAACCTGCTCAATGGATTGCTCTCCTCCAAGTTTTGGGTGCACGTCCCGAAGGCCCTCCTCATTTGAGAATCACTGGTGTTCATCAGAAAAAGGAGATTTTGGACCAGGTAGCTCATAGATTGACTGAAGAAGCAGAAAAGTTGGATATACCATTCCAATTCAATCCTGTAGTCAGCCAATTAGAAAATCTTGATTTTGACAAACTTCGCGTGAAAACTGGGGAGGCACTAGCAATAAGTTCTATTCTCCAATTACATACCCTTTTAGCCTGGGATGATGAAGCAATGCAGAGAAAATCCCCTCTTTTCTTAAAAAGCTCGAACGGAATTCACCTGCAAAGAGTCCTGCCAGTGAGCCAAAGCACATTGGGTGATTTTCTTGAGAAAGATATGGTTAATGGTTATACCCCAAGTCCTGATTCGACCTCATCGTCACCGGCATCTTTAACTGCTTCCAATTCAATGAATATGGAGAGCTTTCTCAATGCCTTATGGGGATTATCACCAAAGGTCATGGTTGTAACAGAGCAAGACTCTAACCATAATGGTCCAACTCTGATGGACAGGCTACTGGAAGCTCTATATTCTTATGCAGCATTATTTGATTGCTTGGAATCCACTGTCTCAAGATCATCATTGGAGAGATTAAGGGTGGAGAAGATGCTTTTTGGTGAGGAAATAAAGAACATTATCGCATGTGAGGGATCTGAACGAAGGGAAAGACATGAGAAGCTGGATAAGTGGTTCCAAAGATTTGATCTAGCCGGGTTCGGTAACGTGCCCTTGAGCTACTTTGGCATGTTGCAAGCAAGGAGGTTCCTTCAAAGCTATGGTTGTGAAGGATATAAAATGAGGGATGAAAATGGGTGTGTATTAATTTGCTGGCAGGATAGGCCCATGTTTTCTATATCAGCTTGGAGATCTAGGAAGTAA 1431 0.4242 MGFMLEEEGSSSVTCSPLQLFSMMSLSPSLGSPHLLLREMKSEQRGLYLIHLLLTCANHVAAGNLENANTTLEQISLLASPDGDTMQRITAYFTEALADRILKTWPGIHRALNSTRMSMLSEEFLVQKLFFELFPFLKVAFVLTNQAIVEAMEGEKIIHIIDLNAAEPAQWIALLQVLGARPEGPPHLRITGVHQKKEILDQVAHRLTEEAEKLDIPFQFNPVVSQLENLDFDKLRVKTGEALAISSILQLHTLLAWDDEAMQRKSPLFLKSSNGIHLQRVLPVSQSTLGDFLEKDMVNGYTPSPDSTSSSPASLTASNSMNMESFLNALWGLSPKVMVVTEQDSNHNGPTLMDRLLEALYSYAALFDCLESTVSRSSLERLRVEKMLFGEEIKNIIACEGSERRERHEKLDKWFQRFDLAGFGNVPLSYFGMLQARRFLQSYGCEGYKMRDENGCVLICWQDRPMFSISAWRSRK* 477
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr7g0050 476 PANTHER BNAA06G02820D PROTEIN 3 266 IPR030008 GO:0003700|GO:0005634|GO:0009739
Apr7g0050 476 PANTHER BNAA06G02820D PROTEIN 296 375 IPR030008 GO:0003700|GO:0005634|GO:0009739
Apr7g0050 476 PANTHER BNAA06G02820D PROTEIN 380 475 IPR030008 GO:0003700|GO:0005634|GO:0009739
Apr7g0050 476 Pfam GRAS domain family 49 473 IPR005202 -
Apr7g0050 476 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 3 266 IPR005202 -
Apr7g0050 476 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 380 475 IPR005202 -
Apr7g0050 476 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 296 375 IPR005202 -
Apr7g0050 476 ProSiteProfiles GRAS family profile. 40 473 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr7g0050 Apr-Chr7 1970422 1973324 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr7g0050 6 476 GRAS Transcription Factor Family AT1G50420 66.250 0.0 655
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Apr7g0050 GRAS 3.2e-137 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr7g0050 - - gmx:100814131 830.476