Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr7g0016 ATGGGTCAACAAGAGAACTTCAAACGGCAGTTGAACCAGCCGGCAGAGTTACCGGCGGCGAAGAAGAGGATAGTGCTCGGCGATCTCACCAATAATAGCACAACGAAGGAGAAGACGGAGATGATGCAGAAGTGCAATGAGGCCTCTTCCTCTTCTTCCATCTACAAGCATCTTCGCGCCTTGGAGATGGAGGTGAATAGAAGGCCAGTGGCGAATTATACGGAGACAGTTCAGAGAGATGTTTCAGAGAAGATGAGAGGGATTCTGGTGGATTGGTTAATGGAGGTTGCTCAGGAATACAACCTCACTTCTGATACCATTTATCTTGCTGTATCTTGCATCGATCGCTTCCTATCTACTCGTCCTATCAACACTAACCACCTTCAACTTCTCGGGGTTTCTTCCTTGCTTATTGCCTCCAAATATGAAGAGATCAGTCCTCCACATGCCGAGGACTTTTGCTATATGACAGATAACACTTACACCCTCGCAGAGGTTACGCGCATGGAGAGGGAGCTCCTCACCTCCTTGAACTTCGACTTGGGCCATCCCACCGCTAAAACTTTTCTCAGAATTTGTATCAAAGCTGCTCAGAAAAATTTTGTGCATTCCAAGCAGCAACTGGAATTCTTGGCTTCTTATCTTTTGGAGTTATGCCTACTAGACTATAAGTGCCTTAAGTTCTTACCGTCCGTGGCTGCAGCGTCCGCATTATTTCTATCCAGGTTTATAATCCAACCAACCAAACATCCTTGGAATATATCGCTAATGTTTGAACATGGATCTGATTCGAAGTGGATGGCCTTTCCACGACAGTTTGACTGTGTAGCATCTTTGACTGCTGGGGAAATTCCTGCAAGTTATTTTGAGTTCGCTGATGAATATGCATCAGAAGAATTTCATATTCGTAAGTTGGATACAACGTTGAACATTGTCCGCACCTCCCACTGA 951 0.4532 MGQQENFKRQLNQPAELPAAKKRIVLGDLTNNSTTKEKTEMMQKCNEASSSSSIYKHLRALEMEVNRRPVANYTETVQRDVSEKMRGILVDWLMEVAQEYNLTSDTIYLAVSCIDRFLSTRPINTNHLQLLGVSSLLIASKYEEISPPHAEDFCYMTDNTYTLAEVTRMERELLTSLNFDLGHPTAKTFLRICIKAAQKNFVHSKQQLEFLASYLLELCLLDYKCLKFLPSVAAASALFLSRFIIQPTKHPWNISLMFEHGSDSKWMAFPRQFDCVASLTAGEIPASYFEFADEYASEEFHIRKLDTTLNIVRTSH* 317
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr7g0016 316 PANTHER CYCLINS 32 257 IPR039361 -
Apr7g0016 316 Pfam Cyclin, C-terminal domain 184 258 IPR004367 -
Apr7g0016 316 PANTHER CYCLIN-A3-1-LIKE 32 257 - -
Apr7g0016 316 CDD CYCLIN 85 174 IPR013763 -
Apr7g0016 316 Gene3D - 54 259 - -
Apr7g0016 316 CDD CYCLIN 184 265 IPR013763 -
Apr7g0016 316 SMART Cyclin_C_2 184 309 IPR004367 -
Apr7g0016 316 SMART cyclin_7 91 175 IPR013763 -
Apr7g0016 316 SMART cyclin_7 188 293 IPR013763 -
Apr7g0016 316 Gene3D - 67 182 - -
Apr7g0016 316 ProSitePatterns Cyclins signature. 86 117 IPR006671 -
Apr7g0016 316 SUPERFAMILY Cyclin-like 184 261 IPR036915 -
Apr7g0016 316 SUPERFAMILY Cyclin-like 54 181 IPR036915 -
Apr7g0016 316 Pfam Cyclin, N-terminal domain 54 181 IPR006671 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr7g0016 Apr-Chr7 918759 920494 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr7g0016 21 256 Core Cell Cycle Gene Families AT5G43080 50.575 3.62e-88 266
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr7g0016 K06627 - zju:107426994 261.922
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr7g0016 7 918759 920494 Apr7g0016 7 918759 920494 ECH