Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr7g0007 ATGAGCTGCAACGGTTGCCGTGCCCTCCGAAAAGGTTGCAGCGAGGATTGCGTGCTGAGACATTGTCTACAGTGGATAGAGAATCCACAAGCCCAGGCTCACGCCACACTATTTGTCGCCAGGTTCTTTGGCCGTGCCACCCTCATCTCTTTCCTTTCTTCAGTACCCACTAACCAAAGATCTGGTATGTTTCGGTCACTTTTGTATGAAGCAGTGGGACGTGCAGTAAATCCAGTGAACGGAGCAGTGGGGCTGCTATGGAGTGGCAAGTGGAACCTCTGCCAGTTGGGGGTTGAGAATGTTCTCCGAGGTGCCGCATTGACTCCACTGCCCCATCACTCATCAAGGAAACTCTTTCCTCATGTCAACGTCGCACAACCTCATACACTCTTGGGAAGCTGTCAGCCACTGATGAATTCGGAGATGACAACCTTGCCAAGTACCACAGGAGACACTGCCTCTCAAACGAAGCTCCTCACTCTTTTCTTCTGA 492 0.5163 MSCNGCRALRKGCSEDCVLRHCLQWIENPQAQAHATLFVARFFGRATLISFLSSVPTNQRSGMFRSLLYEAVGRAVNPVNGAVGLLWSGKWNLCQLGVENVLRGAALTPLPHHSSRKLFPHVNVAQPHTLLGSCQPLMNSEMTTLPSTTGDTASQTKLLTLFF* 164
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr7g0007 163 ProSiteProfiles LOB domain profile. 1 107 IPR004883 -
Apr7g0007 163 PANTHER LOB DOMAIN PROTEIN 1 163 - -
Apr7g0007 163 PANTHER LOB DOMAIN-CONTAINING PROTEIN 38 1 163 - -
Apr7g0007 163 Pfam Lateral organ boundaries (LOB) domain 2 99 IPR004883 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr7g0007 Apr-Chr7 775114 775837 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr7g0007 1 112 AS2 family AT3G49940 69.643 7.43e-58 179
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Apr7g0007 LOB 2.3e-25 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr7g0007 - - gmx:100816269 213.001
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr7g0007 7 775114 775837 Apr7g0007 7 775114 775837 ECH
Apr8g2418 8 34374240 34375604 Apr7g0007 7 775114 775837 ECH
Apr5g1468 5 18716020 18716584 Apr7g0007 7 775114 775837 ECH