Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr6g1425 ATGGTGTTTGGAAGAGTTGATGGAAATGGTTGGGCAAGAATCAAAGAGTTTTCCCTCCTAGTCCTTACAGGGAGGTGGTTCATGATGTTTTCATCATTTATGATCTTGTCAGTGTCTGGAGCAAGCTACATGTTTAGTCTCTACTCCCAAGATATCAAGTCTGTTCTTGGCTATGACCAATCCACTCTCAATCTGTTAAGCTCCCTCAAGGACTTCGGTGACAGCGTAGGCATTCTTTCTGGCCTTATCTATGAAATCACACCCCCTTGGGTAATCTTAACAATTGGGGGGGTTCTCAATTTTTTTGGCTACTTCATGATTTGGCTTGTAGTCACAAGAAAAATTGCAGAACCCCAACTGTGGAACATGTGCTTGTACATCATCATAGGAGCCAATTCTCATTGCTCAACAAACACTGCAGCTCTGGTGACCAGTATTAAGAATTTCCCTGGTGTAAGAGGCATTATCTTAGGCATTTTAAGTGGGTATCTTGGTTTGAGTGCAGCAATAATCACTCAGTTACGCTATGCCTTCTACGGAAATGACACCAAATCTCTAATTTTGCTTTTGGCATGGCTACCAACCGCTACAGCTTTTGTGTTCCTTCCAGTTATCAGAAAACACAGGGGTATTCAACACCCAAATGACGCCAAAGCATTCTACAGGTTCCTCTATTTGATAATAGTCCTTGCAGGGTTTCTCATGATTGTAATCATAGTACAAAAATGTTTCCCCTTCACACAGAAAGAGTATTATGTTACTACCAGTGTCATGCTTCTCTTGCTCATCCTTCCACTTGCTGTTGTTATTGTTGAAGAACACAGGATTTGGAAGAGCAAACAAGAAGATCGTCAAGGGCTCTTGAATGTAACCATAACCACAGAAGATCCTTATCAAGAGAAGTATCCACATGCTCCCCATGAAGAACAAACTATACAAGAAAGAGTTTCTTGTTGGAAAAACATACTCGAGACCCCAGAAAGAGGTGAAGACTATACAATACTTCAAGCCATTTTTAGCCTTGACATGGCGATTCTTCTATTGGCTGCTGTTAGTGGAGTTGGTAGCAACCTGACTGTGATAAATAATTTAAGTCAGATTGGAGCCTCATTAGGATATCCTGCACAAACTATAATCACATTTGTCTCCCTTGCGGCCATTTGGATCTGTCTAGGTAAACTAGCACAAGGGGTTGTCTCAGAATTTATCATAATCAAATTCAAAGTCCCTAGGCCTCTCATACTCACATCAATCCTTGGATTATCTTGTGTTAGTCACCTTTTAATTGCATTCGATGTCCCAAATGGTCTCTATGTGGCTTCAATTATTACTGGGTTCTGCTTTGGGGCAACCTTCCCATTAATCCAATCCATAATATCTGAAATTTTTGGCCTAAAACATTATTCAACATTGTACAATGTTGGGTCATTAGCAAATCCTATTGGGTCATACTTTCTCAGTGTGAGGGTTGCAGGGTATCTGTATGACAGGGAAGCCAGAAGGCAAAAGGAAGAATTGGGGCTAAAGGAAAAGAATGGGGAGGAATTGAACTGTATTGGGAGTGAGTGCTACAAATTAGCTTTCATTATAATCGCTACAGTTTGCATGTTTGGGGCGCTTGTGTCACTCATTTTGGTGCTTAGAACTAGGCAGTTCTACAAGAGCGACATATACAACAAATTCGAAGAAGCTAGAATTGATGAAACTGAAGTTGCTACCTCAGAACAGGATTAG 1734 0.4083 MVFGRVDGNGWARIKEFSLLVLTGRWFMMFSSFMILSVSGASYMFSLYSQDIKSVLGYDQSTLNLLSSLKDFGDSVGILSGLIYEITPPWVILTIGGVLNFFGYFMIWLVVTRKIAEPQLWNMCLYIIIGANSHCSTNTAALVTSIKNFPGVRGIILGILSGYLGLSAAIITQLRYAFYGNDTKSLILLLAWLPTATAFVFLPVIRKHRGIQHPNDAKAFYRFLYLIIVLAGFLMIVIIVQKCFPFTQKEYYVTTSVMLLLLILPLAVVIVEEHRIWKSKQEDRQGLLNVTITTEDPYQEKYPHAPHEEQTIQERVSCWKNILETPERGEDYTILQAIFSLDMAILLLAAVSGVGSNLTVINNLSQIGASLGYPAQTIITFVSLAAIWICLGKLAQGVVSEFIIIKFKVPRPLILTSILGLSCVSHLLIAFDVPNGLYVASIITGFCFGATFPLIQSIISEIFGLKHYSTLYNVGSLANPIGSYFLSVRVAGYLYDREARRQKEELGLKEKNGEELNCIGSECYKLAFIIIATVCMFGALVSLILVLRTRQFYKSDIYNKFEEARIDETEVATSEQD* 578
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr6g1425 577 CDD MFS_Mch1p_like 24 539 - -
Apr6g1425 577 SUPERFAMILY MFS general substrate transporter 25 212 IPR036259 -
Apr6g1425 577 Pfam Major Facilitator Superfamily 346 549 IPR011701 GO:0022857|GO:0055085
Apr6g1425 577 Pfam Nodulin-like 25 270 IPR010658 -
Apr6g1425 577 SUPERFAMILY MFS general substrate transporter 229 552 IPR036259 -
Apr6g1425 577 PANTHER UNCHARACTERIZED NODULIN-LIKE PROTEIN 4 571 - -
Apr6g1425 577 Gene3D MFS general substrate transporter like domains 337 554 IPR036259 -
Apr6g1425 577 PANTHER MFS TRANSPORTER 4 571 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr6g1425 Apr-Chr6 22756500 22758278 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr6g1425 12 563 Nodulin-like Gene Family AT2G39210 57.348 0.0 662
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr6g1425 - - gmx:102661181 819.69