Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr6g1416 ATGTACACACGTCCAATTGAAAAATCAAACAAACAACAAAACATGTTCCTAAAAACGGAGTTTTTGCTCCTAATCCTCACCCTTGTTTTAACAACCACCACCACAGCCATAAACCCAGGTTCCACCCTCTCTGCCTCTTCCAACCAAACATGGCCTTCGACCAGCGCCACCTTCTCCCTCCGCTTCATCTCTGTTCAGCCACCAACCTCTCCCCCTTCCTTCACCGCCGCAATCGTCTACTCCGGCGGCGCCCCCGTCGTCTGGTCTGCCGGAAATGGCACCGCCGTTGACTCCGGTGGGTCCCTCCAATTCCTCTCATCCGGTGCCCTCCGCCTCGTCAACGGATCCGGCGCCACCGTCTGGGACTCCGGCACCGCCAACCGCGGTGCTACGTCAGCAACTCTCGAAGACAGTGGCAATTTGGTAATTTCAAACGGTACGGGTACCCTCTGGTCCAGCTTTGACCACCCCACTGATACTCTTTTGCCCTCTCAGAATTTCACCGTTGATAAGGTTCTCACATCTGAACGTTACTCCTTTAGTCTTAGTCGAATTGGCAATTTAACATTGAAGTGGAACAATAGCATATTGTTTTGGAACCAGGGTTTGAATTCTTCTGTGAATGTGAGTTTGAATGCTCCTGTGTTGGGGTTAACATCAATTGGGATTTTGCAACTTTCTGATTTGAATTTGAACACTTCTGTTGTTGTTGCTTATAGTAGTGACTATGCTGAGGGGGGTAGTGATATTTTGAGGGTGTTGAAGTTGGATAATGATGGGAATTTGAAGATTTTTAGCAGTAGTAAGGGTAGTGGAATTGCTACTGTCAGATGGGCTGCAGTTCAGGATCAGTGTGAGGTTTATGCTTACTGTGGGAACTATGGAATATGTAGTTACAATGATTCCAATCCAGTTTGTGGGTGCCCGTCGGAGAATTTCGAGATGGTTGATCCAAGTGACAGTAGGAAAGGGTGTAGGAGGAAGGTGAGTCTAGATACTTGTCAAGGGAATGCAACTATGTTGACTTTGGATCATGCTCAGTTTTTGACTTATCCACCTGAGCTTCAGTCAGATATTTTTTTCATTGGTATATCGGCTTGTAGAGGAAATTGCCTTTCAAACTCGCCTGGCTGTTTTGCTTCTACTTCCTTGTCGGATGGGACGGGGCAATGTTACATTAAATCCGTAGATTTTGTTAGTGGATATCATAATCCTTCCTTGCCTAGTACTTCGTATGTCAAAGTGTGTCCACCACTGGCACCGAATCCACCACCCTCTTTGGGGGAGACTGTGAGGCAAAAGAGTACGAGGGTACCTGCTTGGGTTGTAGTGGTTGTTGTTTTGGGTACCCTTTTAGCTTTGATTGCCTTTGAAGGTGGTTTATGGATGTGGTGTTGTAGGAACAGCACGAGGTTTGGTGGATTGTCTGCTCAGTATGCTCTTCTTGAGTATGCTTCCGGTGCGCCTGTGCAGTTCTCATACAAGGAACTCCAGCGTGCAACAAAGGGGTTCAAGGAGAAGCTAGGAGCTGGTGGATTTGGTGCAGTGTACAGAGGAACTCTTGTTAATAAAACTGTTGTCGCAGTGAAGCAACTTGAGGGTATTGAGCAAGGTGAGAAACAGTTTAGGATGGAAGTTGCCACTATAAGTAGCACTCATCATCTGAATTTGGTGAGACTAATTGGCTTTTGCTCAGAAGGTCGCCACAGGCTTCTAGTTTATGAGTTCATGAAAAATGGATCTCTTGATAATTTTCTATTCCCGACAGAACATTCAGGAAAATTTTTGAATTGGGAGTATCGATACAACATTGCCCTGGGCACTGCAAGAGGCATCACATACCTTCATGAGGAGTGTCGTGACTGCATAGTTCACTGTGATATAAAACCCGAAAATATTCTCTTGGATGAGAATTATGTTGCCAAAGTCTCTGATTTTGGCCTTGCAAAGCTCATTAACCCAAAGGACCATAGGCATCGGACCTTAACAAGTGTGAGAGGAACTAGAGGATATTTAGCCCCAGAGTGGCTTGCAAATCTTCCCATAACATCCAAATCTGATGTTTATGGCTATGGCATGGTTTTGTTGGAGATTGTGAGTGGAAGGAGGAATTTTGATGTCTCAGATGAAACAAATAAGAAGAAGTTCTCTTTGTGGGCCTATGAAGAGTTTGAGAAAGGTAACATCAGTGGGATTTTGGACAAAAGACTAGCTGACCAAGAAGTTGACATGGAGAAACTGAAAAGAGCAATTGAGGCAAGCTTTTGGTGCATCCAAGAGCAGCCATCTCAGAGACCAACAATGAGCAAAGTGGTGCAAATGCTAGAAGGGGTAACAGAGATTGAGAAGCCACCTGCCCCAAAATCAGTGATGGAAGGACATGTTAGTGGAACCAGCACATTCCTAAGTAGCAATGCCAGTGCTTTCTCCACAGTTGGAGTTTCCCCACATGGTCCCTCATCATCATCATCATTTCAAACTAGTGGTGTTTCAACCTTCACCTCAGGAAGGAACCCTGAAAAGGCAACTTTAATCCTTTTACAATCAGAAACATGA 2556 0.4531 MYTRPIEKSNKQQNMFLKTEFLLLILTLVLTTTTTAINPGSTLSASSNQTWPSTSATFSLRFISVQPPTSPPSFTAAIVYSGGAPVVWSAGNGTAVDSGGSLQFLSSGALRLVNGSGATVWDSGTANRGATSATLEDSGNLVISNGTGTLWSSFDHPTDTLLPSQNFTVDKVLTSERYSFSLSRIGNLTLKWNNSILFWNQGLNSSVNVSLNAPVLGLTSIGILQLSDLNLNTSVVVAYSSDYAEGGSDILRVLKLDNDGNLKIFSSSKGSGIATVRWAAVQDQCEVYAYCGNYGICSYNDSNPVCGCPSENFEMVDPSDSRKGCRRKVSLDTCQGNATMLTLDHAQFLTYPPELQSDIFFIGISACRGNCLSNSPGCFASTSLSDGTGQCYIKSVDFVSGYHNPSLPSTSYVKVCPPLAPNPPPSLGETVRQKSTRVPAWVVVVVVLGTLLALIAFEGGLWMWCCRNSTRFGGLSAQYALLEYASGAPVQFSYKELQRATKGFKEKLGAGGFGAVYRGTLVNKTVVAVKQLEGIEQGEKQFRMEVATISSTHHLNLVRLIGFCSEGRHRLLVYEFMKNGSLDNFLFPTEHSGKFLNWEYRYNIALGTARGITYLHEECRDCIVHCDIKPENILLDENYVAKVSDFGLAKLINPKDHRHRTLTSVRGTRGYLAPEWLANLPITSKSDVYGYGMVLLEIVSGRRNFDVSDETNKKKFSLWAYEEFEKGNISGILDKRLADQEVDMEKLKRAIEASFWCIQEQPSQRPTMSKVVQMLEGVTEIEKPPAPKSVMEGHVSGTSTFLSSNASAFSTVGVSPHGPSSSSSFQTSGVSTFTSGRNPEKATLILLQSET* 852
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr6g1416 851 PANTHER G-TYPE LECTIN S-RECEPTOR SERINE/THREONINE-PROTEIN KINASE 21 841 - -
Apr6g1416 851 PIRSF SRK 9 831 IPR024171 GO:0004674
Apr6g1416 851 ProSitePatterns Serine/Threonine protein kinases active-site signature. 623 635 IPR008271 GO:0004672|GO:0006468
Apr6g1416 851 Gene3D - 157 280 IPR036426 -
Apr6g1416 851 Gene3D - 29 156 IPR036426 -
Apr6g1416 851 SUPERFAMILY alpha-D-mannose-specific plant lectins 85 203 IPR036426 -
Apr6g1416 851 CDD STKc_IRAK 508 777 - -
Apr6g1416 851 PANTHER OS07G0415500 PROTEIN 21 841 - -
Apr6g1416 851 ProSiteProfiles Bulb-type lectin domain profile. 34 156 IPR001480 -
Apr6g1416 851 Gene3D Phosphorylase Kinase; domain 1 475 576 - -
Apr6g1416 851 Gene3D Transferase(Phosphotransferase) domain 1 577 790 - -
Apr6g1416 851 Pfam D-mannose binding lectin 86 181 IPR001480 -
Apr6g1416 851 ProSiteProfiles Protein kinase domain profile. 502 778 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr6g1416 851 SMART serkin_6 502 775 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr6g1416 851 MobiDBLite consensus disorder prediction 812 836 - -
Apr6g1416 851 ProSitePatterns Protein kinases ATP-binding region signature. 508 530 IPR017441 GO:0005524
Apr6g1416 851 SUPERFAMILY Protein kinase-like (PK-like) 485 776 IPR011009 -
Apr6g1416 851 CDD B_lectin 46 157 IPR001480 -
Apr6g1416 851 Pfam S-locus glycoprotein domain 243 309 IPR000858 GO:0048544
Apr6g1416 851 ProSiteProfiles Bulb-type lectin domain profile. 158 277 IPR001480 -
Apr6g1416 851 SMART blect_4 42 157 IPR001480 -
Apr6g1416 851 Pfam Protein kinase domain 505 773 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr6g1416 Apr-Chr6 22372351 22375658 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr6g1416 475 785 Receptor kinase-like Gene Family AT5G20050 43.385 3.03e-82 270
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_SD-2b Apr6g1416 Pkinase 6.2e-52 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr6g1416 - - gmx:100795819 1391.71
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr6g1416 6 22372351 22375658 Apr6g1416 6 22372351 22375658 ECH