Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr6g1412 ATGGCAAGCCCACAATCCAATACCCTGCCACCAGGATTTAGGTTCCACCCTACTGATGAAGAGCTCATTCTTCACTATCTTAGGAAGAAAGTAGCCTCTATACCTTTGCCAGTTTCCATCATTGCTGAGGTTGATATCTACAAGTTCGACCCATGGGAACTACCAGCTAAAGCTGCGTTTGGAGAGAAAGAGTGGTACTTCTTCAGTCCAAGAGACCGAAAGTACCCAAATGGAGCGAGGCCAAACAGGGCTGCTGCTTCAGGGTATTGGAAGGCCACAGGCACTGATAAGAACATAGTGGCATCATTGGCAGGAAGGGGAGGAATTCGAGAACACTTTGGTGTGAAGAAGGCTTTGGTATTCTACAAAGGAAGACCCCCAAAGGGTGTCAAGACCAATTGGATCATGCATGAATATCGCCTAGTTGACACCAACAAACCCATTAAACTCAAAGACACTTCCATGAGGTTGGATGACTGGGTTCTATGTCGGATATACAAGAAGTCAAAGCATGCTCTATCTTCCACTACAGAGGCAGCATCAGTGCAAGTGAATGATCAACAAGATCAAACAGAAGAAGAGGAGCTAATCAAAGACACCCTTTTACCAATCTCAAAGAGTCATGTCCCTTCTCTTCAAAACACATTAATTTCTCAAAAATCCATATCCTTCTCCAACTTGTTAGATGCCACGGACTACTCCATGTTGAGCAACATTTTATCTGAAAACCATTTCAACAACCCAATTCCAAGTTCTGGCTTCAATTGTGAGACTATGAATCAAGAACTCCCCCAAGGCCAAAACTACACTGCCACTACTAATAGCAACTTGTTTCAAAAGAACCCTTCAATTCCTTACATGGAAAATATGATGAGGCCCAAACGCCAGCTTTCAAACATAGATGAAGACGCGTTATACCCATCAAAGAAATTCCATAGTTCCTCTTGCAATTTCCCTAACACCAACCTCCAAAACCAGAACCCACAATGGAACTTCCTCTCCAAGCAGCCATTAATGAATCAGCAGTTACTTCCGGTTCCTCAGTATCTTCCATTTCAGTGA 1062 0.4341 MASPQSNTLPPGFRFHPTDEELILHYLRKKVASIPLPVSIIAEVDIYKFDPWELPAKAAFGEKEWYFFSPRDRKYPNGARPNRAAASGYWKATGTDKNIVASLAGRGGIREHFGVKKALVFYKGRPPKGVKTNWIMHEYRLVDTNKPIKLKDTSMRLDDWVLCRIYKKSKHALSSTTEAASVQVNDQQDQTEEEELIKDTLLPISKSHVPSLQNTLISQKSISFSNLLDATDYSMLSNILSENHFNNPIPSSGFNCETMNQELPQGQNYTATTNSNLFQKNPSIPYMENMMRPKRQLSNIDEDALYPSKKFHSSSCNFPNTNLQNQNPQWNFLSKQPLMNQQLLPVPQYLPFQ* 354
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr6g1412 353 Pfam No apical meristem (NAM) protein 10 141 IPR003441 GO:0003677|GO:0006355
Apr6g1412 353 ProSiteProfiles NAC domain profile. 9 168 IPR003441 GO:0003677|GO:0006355
Apr6g1412 353 PANTHER OS01G0104200 PROTEIN 4 235 - -
Apr6g1412 353 PANTHER NAC TRANSCRIPTION FACTOR 56 4 235 - -
Apr6g1412 353 SUPERFAMILY NAC domain 4 168 IPR036093 GO:0003677|GO:0006355
Apr6g1412 353 Gene3D NAC domain 18 173 IPR036093 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr6g1412 Apr-Chr6 22063908 22066039 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr6g1412 7 299 NAC Transcription Factor Family AT3G04070 53.355 7.24e-103 305
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Apr6g1412 NAM 3.5e-40 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr6g1412 - - gmx:100817074 532.717
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr6g1412 6 22063908 22066039 Apr6g1412 6 22063908 22066039 ECH