Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr6g1371 ATGGAGAAGAACCTTGGTGACCATTCTGGCAGTTTCGTTCGCAATGATAAGGAGGATGCCAATGTCAATGACACCGCTCATTCGTCGATGGCACCAGAGCCTACAGATAAAGTCGATGGCGAAATTGAAAAAGCCGCAGATGCAGACCACGTTCATGGAGCACCAGAATCAAAAGAAGAGGAAAAAGAAGAAGCAATTGTCGAGGTTCCACCAGAATCTCCCCCTCCGAGCCTCGAGAAGGTTTCTGAAGGCATAGATCAATTCCTGATGACTTTACAACCGAATGACAACAACAACTACAACCACAATGTAGATGCCAAGAAAGTCACATTGGAGATGGCTAATTTCATCCACACGTTCTTAGATTTGGTGGAACAGAAGATCGCAAAGTACGAAACAGGTGAAGCCAAATGGAGCGAGGCGGCGGAGGAGGATTCATCGTTTTTGGAATTCGTGAATCGCATTTCAAAGCTGTTGAAATTATTTGCAGAGTCTCAAGCTGAAGAGGAACAAGAAGAAAACAAGGTCAAGGGAAGAAAAGACCTTTTGATCAACAGCCTTGGCGCCATTCAGCAACGAGCAATGTCATTTTTGGAGGAGGCGTTTCGATCACTGTTGGAAGAATCTAGAAACCAAGACAAATCAGAACCCGACCCAAAAGGGAAACACGTGGCAGAACCGTTGGAGTCTGAGCCAGCCACTGAGACGGTTACAGATTTCCCCGGTTTCACGGAGGAAACAATTACAAATCTGAAGAAGATAGCAAAGGAAATGATAGCAGGTGGGTACAAATACGAGTGCTGCCAGGTGTATGCAATTTCAAGGCGGCACACGTTCGAGGAGAGCTTGCACAAACTGGGCTACGAGAAAATCAGCGTCGATGAGATTCAAAAAATGCAATGGGAAACGCTGGAGAGGGAGATTCCAACGTGGATAAACATCTTCAAAGAGTGCACCACACTATGGTTCCCTAACGAACGAAAACTGACTGAGTCGGTGTTCGCCGACGAGCCTTCGAAGTCAGCGAGCCTTTTCAAATACCTTTCTCGTAGCATTATGATTCAGCTTCTCAATTTTGCAGAGTGCGTCGCTATGACAAAGCGCGCAGGAGAAAAGCTCTTCAAATTGCTCGACATGTATGAAACCCTAAGGGACGTGATTCCAAATATGGAGAATCTTTTTCCCCTGGAATGTGTAGCAGAACTCAAGTCTGAATTAACATTGGCTAAGTGTAGACTTGGCGAGTCTGCGGTGTTGATATTTTGCGATCTCGAAAACTCAATCAAGTCCGAAACCGGTAAAATACCGGTTGCCGGTGGCGCCGTTCATCCTTTAACGCGCTACATCATGAACTACCTGAGGTTAGCGTGTGAATACAAAGACACTTTGGAAGAGGTCTTCAAGGAACACTCGAAGATTGAGCGTGCAGACTCAACAAGTAGGCCTCACTATGAAGGAGGTGAAAATAAAAATAACAACCAAAGAGATAAAGAAAACATGTCACCGTTTGCAGCGCAGTTACTGAGGGTTATGGAGCTTCTTGACTCAAACCTTGAAGGGAAGGCGAAGTTGTACAAAGAGGTAGCACTAAGCTGCATCTTCATGATGAATAATGGGAGGTACATCGTTCAAAAGATCAAAGGTTCTGCAGAGATTTACCAAGTTATGGGTGAAACGTGGTGTCGTAAAAGATCCACAGAGTTGAGGACATACCACAAGAACTATAAGATAGAAACGTGGGGTAAAATTGTCAGTTGCCTTAGCCTTAAAGGGGTGAGCGATAGTGGGAAGGTGCACAAGCCGGTGGTGAAGGAACGATTCAAGACCTTTAATGCGTTATTTGAGGAGATTCATAAGACGCAGAGTACGTGGGTGGTGAGTGATGAACAGCTTCAGTCAGAGCTAAGGGTTTCTATTTCGGCACTTGTGATTCCTGCGTATAGGTCATTCTTAGGGAGGTTTTCGCAATACCTGGACCCAGGGAGACAAACAGAGAAGTATATCAAGTACCAAGCTGAGGATATAGAGAATTATATTGATGAGCTATTTGATGGGAACCCTCACCATCAAGGCGCTGCTAGAAAGAAAGCATGA 2094 0.4513 MEKNLGDHSGSFVRNDKEDANVNDTAHSSMAPEPTDKVDGEIEKAADADHVHGAPESKEEEKEEAIVEVPPESPPPSLEKVSEGIDQFLMTLQPNDNNNYNHNVDAKKVTLEMANFIHTFLDLVEQKIAKYETGEAKWSEAAEEDSSFLEFVNRISKLLKLFAESQAEEEQEENKVKGRKDLLINSLGAIQQRAMSFLEEAFRSLLEESRNQDKSEPDPKGKHVAEPLESEPATETVTDFPGFTEETITNLKKIAKEMIAGGYKYECCQVYAISRRHTFEESLHKLGYEKISVDEIQKMQWETLEREIPTWINIFKECTTLWFPNERKLTESVFADEPSKSASLFKYLSRSIMIQLLNFAECVAMTKRAGEKLFKLLDMYETLRDVIPNMENLFPLECVAELKSELTLAKCRLGESAVLIFCDLENSIKSETGKIPVAGGAVHPLTRYIMNYLRLACEYKDTLEEVFKEHSKIERADSTSRPHYEGGENKNNNQRDKENMSPFAAQLLRVMELLDSNLEGKAKLYKEVALSCIFMMNNGRYIVQKIKGSAEIYQVMGETWCRKRSTELRTYHKNYKIETWGKIVSCLSLKGVSDSGKVHKPVVKERFKTFNALFEEIHKTQSTWVVSDEQLQSELRVSISALVIPAYRSFLGRFSQYLDPGRQTEKYIKYQAEDIENYIDELFDGNPHHQGAARKKA* 698
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr6g1371 697 MobiDBLite consensus disorder prediction 1 79 - -
Apr6g1371 697 MobiDBLite consensus disorder prediction 474 495 - -
Apr6g1371 697 Pfam Exo70 exocyst complex subunit 311 681 IPR046364 GO:0000145|GO:0005546|GO:0006887
Apr6g1371 697 PANTHER EXOCYST SUBUNIT EXO70 FAMILY PROTEIN 50 688 - -
Apr6g1371 697 MobiDBLite consensus disorder prediction 34 68 - -
Apr6g1371 697 PANTHER EXOCYST COMPLEX PROTEIN EXO70 50 688 IPR004140 GO:0000145|GO:0006887
Apr6g1371 697 MobiDBLite consensus disorder prediction 208 229 - -
Apr6g1371 697 Gene3D Exocyst complex component Exo70 126 692 - -
Apr6g1371 697 MobiDBLite consensus disorder prediction 1 23 - -
Apr6g1371 697 SUPERFAMILY Cullin repeat-like 138 684 IPR016159 -
Apr6g1371 697 MobiDBLite consensus disorder prediction 208 236 - -
Apr6g1371 697 MobiDBLite consensus disorder prediction 474 498 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr6g1371 Apr-Chr6 20699228 20701321 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr6g1371 2 693 EXO70 exocyst subunit family AT5G13990 48.396 0.0 647
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr6g1371 K07195 - gmx:100819960 920.228