Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr6g1367 ATGGCTTCAAACACATTGATGAGTTCTGCTGTCACAGCCTTTCCCTCTCTTCTTTCTTCCTCAAAATCAAGATTTGCCAATTCTCTTCCCCTTTCTTGCTTTGCTTCCAATGCCTCTTCTCGCTTCTCCATGAGTGCTGACTGGATGCCAGGCCAGCCTAGACCCCCTTACCTTGATGGTTCAGCTCCAGGTGACTTTGGATTCGACCCGCTTCGTCTTGGTGAAGTACCTGAGAATCTCGAGAGATTCAAAGAGTCAGAACTCATTCACTGCAGATGGGCCATGCTTGCAGTCCCAGGGATTTTGGTACCAGAGGCATTGGGCTTAGGCAATTGGGTAAAAGCTCAGGAATGGGCAGCAGTTCCTGGAGGCCAAGCAACCTACCTTGGAAACCCTGTTCCATGGGGCACCCTCCCCACCATTCTGGTCATTGAATTTCTTGCTATTGCTTTCGTTGAGCACCAAAGGAGCATGGAGAAAGACACAGAGAAGAAGAAATACCCTGGCGGTGCTTTTGATCCTTTGGGATACTCTAAGGACCCTAAAAAGTTCCACGAATACAAAGTCAAAGAAATTAAGAATGGACGTCTTGCTCTGTTGGCTTTTGTGGGGTTCTGTGTTCAACAATCAGCATATCCCGGAACTGGACCGTTGGAGAACTTGGCCACTCACTTGGCTGATCCGTGGCATAACAACATTGGAAATATCATTATTCCCCAATCGATTTCGCCCTGA 735 0.4789 MASNTLMSSAVTAFPSLLSSSKSRFANSLPLSCFASNASSRFSMSADWMPGQPRPPYLDGSAPGDFGFDPLRLGEVPENLERFKESELIHCRWAMLAVPGILVPEALGLGNWVKAQEWAAVPGGQATYLGNPVPWGTLPTILVIEFLAIAFVEHQRSMEKDTEKKKYPGGAFDPLGYSKDPKKFHEYKVKEIKNGRLALLAFVGFCVQQSAYPGTGPLENLATHLADPWHNNIGNIIIPQSISP* 245
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr6g1367 244 SUPERFAMILY Chlorophyll a-b binding protein 38 238 - -
Apr6g1367 244 PANTHER CHLOROPHYLL A-B BINDING PROTEIN 6, CHLOROPLASTIC 22 234 - -
Apr6g1367 244 Gene3D Chlorophyll a/b binding protein domain 49 235 - -
Apr6g1367 244 PANTHER CHLOROPHYLL A/B BINDING PROTEIN 22 234 IPR001344 GO:0009765|GO:0016020
Apr6g1367 244 Pfam Chlorophyll A-B binding protein 55 209 IPR022796 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr6g1367 Apr-Chr6 20614475 20616124 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr6g1367 1 196 Chloroplast and Mitochondria Gene Families AT3G54890 81.313 8.96e-106 303
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr6g1367 K08907 - gmx:100800350 469.159