Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr6g1366 ATGGATCATCCACACAAAGGTTTTGAGACTGTCACTTGCGTGCTGCAGGGCGCCATAGCATATGAGGATTTTACCGGTAATAAGGGTATACTAGGTATCGGTGATGTTCAGTGGATGACGGCTGGTAGAGGTATAATTCACACTGAAATGGCCGGAGGAGATGGAACCAATACAGCAGTGCAAGTCTGGATCAATTTATCGTCCCAACAAAAAATGATTGAACCAAGGTGTAATGATGTTCGAAGCAAGGACATACCAGCAGTGAAGCAAGATGGGGTAGAAGCTAGGATTTTGGCTGGAGAAGCTTTTGGAGTAAATTCACCAATTTACAACAACACTCAAATCATGTTCCTTGATTTCACTCTCATGCCAAGAGCTCAATTGCATCAACACATTCCAGAGTCATGGAATTCCTTTGTTTATGTTATAGAAGGAGAAGGGACTTTTGGCTCTCTAAGTTCACCTCCAATAAAGAGTCACACTTTATTGGTTTTGGGTCATGGAGATGGCCTATGTGTTTGGAATAATACTCCAAAGCCCTTGAGATTTTTGCTGATGGCAGGAAAGCCACTCAGTGAACCAGTGGTTCATTGTGGACCTTTCGTGATGAATACCCAATCTGAGATCGATAACACTCTTCAAGACTATCGCCAATTCAAGAACGGGTTTGAGATGGGCAAACATTGGAGATGTTAG 696 0.4282 MDHPHKGFETVTCVLQGAIAYEDFTGNKGILGIGDVQWMTAGRGIIHTEMAGGDGTNTAVQVWINLSSQQKMIEPRCNDVRSKDIPAVKQDGVEARILAGEAFGVNSPIYNNTQIMFLDFTLMPRAQLHQHIPESWNSFVYVIEGEGTFGSLSSPPIKSHTLLVLGHGDGLCVWNNTPKPLRFLLMAGKPLSEPVVHCGPFVMNTQSEIDNTLQDYRQFKNGFEMGKHWRC* 232
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr6g1366 231 PANTHER PIRIN-LIKE PROTEIN 2 230 - -
Apr6g1366 231 PANTHER PIRIN-RELATED 2 230 IPR012093 -
Apr6g1366 231 Pfam Pirin C-terminal cupin domain 117 222 IPR008778 -
Apr6g1366 231 Gene3D Jelly Rolls 2 217 IPR014710 -
Apr6g1366 231 Pfam Pirin 2 64 IPR003829 -
Apr6g1366 231 SUPERFAMILY RmlC-like cupins 2 230 IPR011051 -
Apr6g1366 231 PIRSF Pirin 1 230 IPR012093 -
Apr6g1366 231 Gene3D Jelly Rolls 86 191 IPR014710 -
Apr6g1366 231 CDD cupin_pirin_C 115 190 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr6g1366 Apr-Chr6 20607363 20612523 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr6g1366 2 231 Calmodulin-binding Proteins AT3G59260 55.603 4.12e-94 275
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr6g1366 K06911 - mnt:21404588 328.946