Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr6g1324 ATGGCTAGTTTGGGTGCTTCTCCTTCTTTGCTCTTCGTTTCTTTCATTCTACTTGCTTCACACATTTGTGCCTCTGAGCCACAAGCCAAGCCCCCAGTGGTAAAGGGACTATCATATTCTTTCTATTCCCAAACATGTCCTAAGCTTGAAACCATTGTTAGAAACCATCTCAAAAAGGTGTTCAAGCAGGACAATGGCCAAGCCCCTGGCTTACTCCGCATTTTCTTCCATGATTGCTTTGTTCAGGGATGTGATGGGTCAGTGCTGCTAGATGGGAGTCCAGGTGAAAGAGACCAACCTGCCAATGGAGGCATAAGAAGTGAGGCCTTGCAGACCATTGATGATCTAAGGGCTCTTGCCCATAAGGAGTGTGGAAGAATCGTTTCCTGTGCAGATATCACTGTCTTGGCAGCTCGTGATTCTGTTTACCTAACAGGAGGCCCTGATTATGCAGTGCCACTAGGAAGACGTGATGGCATAAGCTTCAGCACTTCAGGGACAAATAATCTTCCATCACCCTTTAACACAACCAGCGTGACCATCAAAACTTTTGCAGCCAAAAACTTTGATGTAACCGATGTGGTTGCCTTATCAGGTGCACACACTTTTGGTCGTGCTCATTGTGGCACATTCTTCAATAGACTTTCTCCTTTAGACCCCAACATGGACAAAACCTTAGCCAAAACACTCCAAGCCACATGCCCAGATGCAAATTCTGGTAACACTGCCAACTTGGACATTAGAACTCCCACAGTTTTTGACAACAAATACTATCTCGACCTAATGAATCGCCAGGGTGTGTTCACTTCTGACCAAGATTTGCTCACTGATAAGAGGACAAAGGGTTTAGTAAATGACTTTGCCGTCAATCAGACCTTGTTTTTCGAGAAATTTGTGGATGCTGTTATAAGGCTGAGCCAATTGGATGTGTTGACAGGAAATCAAGGTGAAATTCGTGCCAAATGCAATGTGATTAACAATAAGAAATCTGTATTGACATCTGTGGTGGAAGAGGCATTGCAATTCGTTGATCAATTTTAA 1041 0.44 MASLGASPSLLFVSFILLASHICASEPQAKPPVVKGLSYSFYSQTCPKLETIVRNHLKKVFKQDNGQAPGLLRIFFHDCFVQGCDGSVLLDGSPGERDQPANGGIRSEALQTIDDLRALAHKECGRIVSCADITVLAARDSVYLTGGPDYAVPLGRRDGISFSTSGTNNLPSPFNTTSVTIKTFAAKNFDVTDVVALSGAHTFGRAHCGTFFNRLSPLDPNMDKTLAKTLQATCPDANSGNTANLDIRTPTVFDNKYYLDLMNRQGVFTSDQDLLTDKRTKGLVNDFAVNQTLFFEKFVDAVIRLSQLDVLTGNQGEIRAKCNVINNKKSVLTSVVEEALQFVDQF* 347
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr6g1324 346 PRINTS Haem peroxidase superfamily signature 68 82 IPR002016 GO:0004601|GO:0006979|GO:0020037
Apr6g1324 346 PRINTS Haem peroxidase superfamily signature 128 145 IPR002016 GO:0004601|GO:0006979|GO:0020037
Apr6g1324 346 PRINTS Haem peroxidase superfamily signature 146 158 IPR002016 GO:0004601|GO:0006979|GO:0020037
Apr6g1324 346 PRINTS Haem peroxidase superfamily signature 193 208 IPR002016 GO:0004601|GO:0006979|GO:0020037
Apr6g1324 346 PRINTS Haem peroxidase superfamily signature 246 261 IPR002016 GO:0004601|GO:0006979|GO:0020037
Apr6g1324 346 CDD secretory_peroxidase 36 325 IPR033905 GO:0004601|GO:0042744
Apr6g1324 346 PRINTS Plant peroxidase signature 46 65 IPR000823 GO:0004601|GO:0006979|GO:0020037
Apr6g1324 346 PRINTS Plant peroxidase signature 70 90 IPR000823 GO:0004601|GO:0006979|GO:0020037
Apr6g1324 346 PRINTS Plant peroxidase signature 127 137 IPR000823 GO:0004601|GO:0006979|GO:0020037
Apr6g1324 346 PRINTS Plant peroxidase signature 146 161 IPR000823 GO:0004601|GO:0006979|GO:0020037
Apr6g1324 346 PRINTS Plant peroxidase signature 192 204 IPR000823 GO:0004601|GO:0006979|GO:0020037
Apr6g1324 346 PRINTS Plant peroxidase signature 244 259 IPR000823 GO:0004601|GO:0006979|GO:0020037
Apr6g1324 346 PRINTS Plant peroxidase signature 260 277 IPR000823 GO:0004601|GO:0006979|GO:0020037
Apr6g1324 346 PRINTS Plant peroxidase signature 300 313 IPR000823 GO:0004601|GO:0006979|GO:0020037
Apr6g1324 346 SUPERFAMILY Heme-dependent peroxidases 36 326 IPR010255 GO:0004601|GO:0006979|GO:0020037
Apr6g1324 346 ProSitePatterns Peroxidases proximal heme-ligand signature. 193 203 IPR019793 -
Apr6g1324 346 Gene3D Peroxidase, domain 2 172 306 - -
Apr6g1324 346 PANTHER PEROXIDASE 15 330 - -
Apr6g1324 346 ProSiteProfiles Plant heme peroxidase family profile. 36 326 IPR002016 GO:0004601|GO:0006979|GO:0020037
Apr6g1324 346 Pfam Peroxidase 53 289 IPR002016 GO:0004601|GO:0006979|GO:0020037
Apr6g1324 346 PANTHER PEROXIDASE 25-RELATED 15 330 IPR000823 GO:0004601|GO:0006979|GO:0020037
Apr6g1324 346 Gene3D - 41 323 - -
Apr6g1324 346 ProSitePatterns Peroxidases active site signature. 68 79 IPR019794 GO:0004601
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr6g1324 Apr-Chr6 18840276 18843886 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr6g1324 9 343 Peroxidase AT1G71695 54.519 2.42e-130 375
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr6g1324 K00430 - gmx:547550 601.668
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr6g1324 6 18840276 18843886 Apr6g1324 6 18840276 18843886 ECH