Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr6g1322 ATGGCTAAGGCTGGTGTGCTGAACTCTTCTTCTTCTTCTTCTTTGTCTTCTCTGTTCTCTTTGTTCTTCATTTCTTGCATTGTGCTGGCTTCTCATTTGCATGCCTCCGCGGCACTTGCCCAGCCCCCAGTGGTGAATGGACTGTCATTTTCTTTCTTTTCGAAAACATGTCCCAATGTTGAAACCATTGTAAGAAACCACCTTAAGAAAGTGTTCAAGAATGACAATGGCCAAGCTCCAGGCTTACTCCGTATTTTCTTCCATGATTGCTTTGTTACGGGATGCGATGGGTCGTTGCTGTTGGATGCGAAAAAAGGTGAAGGTGAAAGGGATCAAGGGGCTAACATAGGAATAAGGACAGAGGCATTGCAGACCATTGATGACCTGCGAGATCTTGTCCACAAGCAGTGTGGAAGGATTGTCTCATGTGCTGACATCACTGCCTTAGCTGCCCGTGATGCCGTTTTTCTTTCTGGTGGCCCTGATTTTGCACTGCCATTAGGAAGAAGAGATGGATTCATTATTAACGCAACAGACACAAGAAATCTTCCATCTCCCTTTGCAACTACTAATCAAACCATTAATAGTTTTGCAGCAAAAAAGGTATTTGATGTCACAGATGTGGTAGCCTTCTCAGGTGCACACACTTTTGGTCGTGCCCATTGTGGAACATTCTTCAATAGACTGTCACCTCAAGACCCCACTATGGATAAAACCTTAGCCAACAACCTCAAGGCCATTTGTCCCAATGGACAGTCACTTAACACAGCCAATCTTGACCTAAGAACCCCAACAATATTTGATAATAAGTACTACATTGATGTAATGAATCGTCAAGGTGTGTTTACCTCTGATCAGGACTTGCTCAATGACCAAAGGACCGTGGGATTAGTTAATGCTTTTGCCAAAGACCAAAACCTATTCTTTCAGAAGTTTGCTGATGCTATGGTGAAATTGAGCCAATTGGGTGTTTTGACTGGGAATCAAGGTGAAATTCGTGCCAAGTGTAATGTGATAAATAAGAAGCAATCTACCTTGAAATCTATGGTAGAAGAGGTGGTAGAATTGACTGAGCAGTTCTAA 1083 0.4294 MAKAGVLNSSSSSSLSSLFSLFFISCIVLASHLHASAALAQPPVVNGLSFSFFSKTCPNVETIVRNHLKKVFKNDNGQAPGLLRIFFHDCFVTGCDGSLLLDAKKGEGERDQGANIGIRTEALQTIDDLRDLVHKQCGRIVSCADITALAARDAVFLSGGPDFALPLGRRDGFIINATDTRNLPSPFATTNQTINSFAAKKVFDVTDVVAFSGAHTFGRAHCGTFFNRLSPQDPTMDKTLANNLKAICPNGQSLNTANLDLRTPTIFDNKYYIDVMNRQGVFTSDQDLLNDQRTVGLVNAFAKDQNLFFQKFADAMVKLSQLGVLTGNQGEIRAKCNVINKKQSTLKSMVEEVVELTEQF* 361
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr6g1322 360 SUPERFAMILY Heme-dependent peroxidases 47 340 IPR010255 GO:0004601|GO:0006979|GO:0020037
Apr6g1322 360 Coils Coil 339 359 - -
Apr6g1322 360 ProSiteProfiles Plant heme peroxidase family profile. 47 340 IPR002016 GO:0004601|GO:0006979|GO:0020037
Apr6g1322 360 Gene3D - 52 337 - -
Apr6g1322 360 CDD secretory_peroxidase 47 339 IPR033905 GO:0004601|GO:0042744
Apr6g1322 360 PRINTS Haem peroxidase superfamily signature 79 93 IPR002016 GO:0004601|GO:0006979|GO:0020037
Apr6g1322 360 PRINTS Haem peroxidase superfamily signature 141 158 IPR002016 GO:0004601|GO:0006979|GO:0020037
Apr6g1322 360 PRINTS Haem peroxidase superfamily signature 159 171 IPR002016 GO:0004601|GO:0006979|GO:0020037
Apr6g1322 360 PRINTS Haem peroxidase superfamily signature 207 222 IPR002016 GO:0004601|GO:0006979|GO:0020037
Apr6g1322 360 PRINTS Haem peroxidase superfamily signature 260 275 IPR002016 GO:0004601|GO:0006979|GO:0020037
Apr6g1322 360 Gene3D Peroxidase, domain 2 185 320 - -
Apr6g1322 360 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 26 - -
Apr6g1322 360 PANTHER PEROXIDASE 24 344 - -
Apr6g1322 360 Pfam Peroxidase 64 304 IPR002016 GO:0004601|GO:0006979|GO:0020037
Apr6g1322 360 PRINTS Plant peroxidase signature 57 76 IPR000823 GO:0004601|GO:0006979|GO:0020037
Apr6g1322 360 PRINTS Plant peroxidase signature 81 101 IPR000823 GO:0004601|GO:0006979|GO:0020037
Apr6g1322 360 PRINTS Plant peroxidase signature 140 150 IPR000823 GO:0004601|GO:0006979|GO:0020037
Apr6g1322 360 PRINTS Plant peroxidase signature 159 174 IPR000823 GO:0004601|GO:0006979|GO:0020037
Apr6g1322 360 PRINTS Plant peroxidase signature 206 218 IPR000823 GO:0004601|GO:0006979|GO:0020037
Apr6g1322 360 PRINTS Plant peroxidase signature 258 273 IPR000823 GO:0004601|GO:0006979|GO:0020037
Apr6g1322 360 PRINTS Plant peroxidase signature 274 291 IPR000823 GO:0004601|GO:0006979|GO:0020037
Apr6g1322 360 PRINTS Plant peroxidase signature 314 327 IPR000823 GO:0004601|GO:0006979|GO:0020037
Apr6g1322 360 PANTHER PEROXIDASE 25-RELATED 24 344 IPR000823 GO:0004601|GO:0006979|GO:0020037
Apr6g1322 360 ProSitePatterns Peroxidases active site signature. 79 90 IPR019794 GO:0004601
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr6g1322 Apr-Chr6 18815004 18817634 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr6g1322 43 356 Peroxidase AT1G71695 53.125 5.64e-119 347
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr6g1322 K00430 - gmx:547550 495.738