Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr6g1321 ATGGCTGGGGTTAGTGAAAATGGTTCTTTTTCTTTGTACACTTTGCTCTTGATTTCTTCACTTTTGTTATTGGCTTCCCAAACCCATGTTTCTTCTGAGAGAATTGCGAGGCCTCCCATTGTGAATGGACTATCATGGAACTACTATTGGATTTCATGTCCAAGGGTTGAAAGGATTATAAGGAAGCATCTTGAGGGTGTCTTCAAAAAGGACACTGGCCAAGCTCCTGGCATACTTCGACTCTTCTTCCATGACTGCTTTGCTCAAGGGTGCGATGCATCTATATTGTTGAATGGGGTGGATGGAGAAGAAGATGAAAAGGAACACCCTGCCAACCTTGGCTTAAGGGAAGAAGCCATTCAAACCATTGAAAACCTTCGTGCTCTTATTCGTAAGCAGTGTCCAAGAGTTGTCACTTGTGCAGATATTCTTGTTATTGCGGCGCGCGAAGCCGTTCGCCAATTAGGAGGACCCGATTTTGAGGTGCCTTTGGGAAGAAAAGATAGCTTCAATTTCAACGTAACGGCACCTGACAACCTTCCAGCACCATTCTTAAGAACCGATGAGCTCCTCGAAATTTTCGGAGGCAGAAACTTCGATGCCACAGATGTTGTTGCTCTCTCAGGTGCCCACACTTATGGTCGAGCACACTGTCCCTCATTATTCAACAGGACCATAGAATCAGACCCACCAATAGAACAAAACTTCAAGAACAAACTCGATTTGACGTGTCCCAGTGATGAATTCCCCAACACCGTTGATTTGGACATCAGAACTCCGAATAAGTTCGACAACATGTATTACATCAACCTTTTGAACAACCAGGGTGTGTTCACCTCCGACCAAGACTTGGCGAGTAACTTCAAAACAAAGGAGATTGTCAATACTTTTGCTTCTGACCAGAAAAAGTTTTTTGACAAATTTGCCGATGCTTTTGTGAAGGTGAGCCAATTGGGTGTTTTGACTAAAGATCGAGATGGGGAAGTTCGCAAGACATGCTTTGCTCCAAATAAGAGGAAATCTTCGGTGGCATTTGTGGTGGAAGAAGTGGTCGAATTGGCTGAGAAGCTTTGA 1074 0.4413 MAGVSENGSFSLYTLLLISSLLLLASQTHVSSERIARPPIVNGLSWNYYWISCPRVERIIRKHLEGVFKKDTGQAPGILRLFFHDCFAQGCDASILLNGVDGEEDEKEHPANLGLREEAIQTIENLRALIRKQCPRVVTCADILVIAAREAVRQLGGPDFEVPLGRKDSFNFNVTAPDNLPAPFLRTDELLEIFGGRNFDATDVVALSGAHTYGRAHCPSLFNRTIESDPPIEQNFKNKLDLTCPSDEFPNTVDLDIRTPNKFDNMYYINLLNNQGVFTSDQDLASNFKTKEIVNTFASDQKKFFDKFADAFVKVSQLGVLTKDRDGEVRKTCFAPNKRKSSVAFVVEEVVELAEKL* 358
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr6g1321 357 Gene3D Peroxidase, domain 2 182 316 - -
Apr6g1321 357 PRINTS Haem peroxidase superfamily signature 75 89 IPR002016 GO:0004601|GO:0006979|GO:0020037
Apr6g1321 357 PRINTS Haem peroxidase superfamily signature 138 155 IPR002016 GO:0004601|GO:0006979|GO:0020037
Apr6g1321 357 PRINTS Haem peroxidase superfamily signature 156 168 IPR002016 GO:0004601|GO:0006979|GO:0020037
Apr6g1321 357 PRINTS Haem peroxidase superfamily signature 203 218 IPR002016 GO:0004601|GO:0006979|GO:0020037
Apr6g1321 357 PRINTS Haem peroxidase superfamily signature 256 271 IPR002016 GO:0004601|GO:0006979|GO:0020037
Apr6g1321 357 ProSiteProfiles Plant heme peroxidase family profile. 43 337 IPR002016 GO:0004601|GO:0006979|GO:0020037
Apr6g1321 357 PANTHER PEROXIDASE 25-RELATED 34 341 IPR000823 GO:0004601|GO:0006979|GO:0020037
Apr6g1321 357 PANTHER PEROXIDASE FAMILY PROTEIN 34 341 - -
Apr6g1321 357 ProSitePatterns Peroxidases active site signature. 75 86 IPR019794 GO:0004601
Apr6g1321 357 Gene3D - 47 333 - -
Apr6g1321 357 SUPERFAMILY Heme-dependent peroxidases 43 337 IPR010255 GO:0004601|GO:0006979|GO:0020037
Apr6g1321 357 CDD secretory_peroxidase 43 335 IPR033905 GO:0004601|GO:0042744
Apr6g1321 357 ProSitePatterns Peroxidases proximal heme-ligand signature. 203 213 IPR019793 -
Apr6g1321 357 Pfam Peroxidase 61 300 IPR002016 GO:0004601|GO:0006979|GO:0020037
Apr6g1321 357 PRINTS Plant peroxidase signature 53 72 IPR000823 GO:0004601|GO:0006979|GO:0020037
Apr6g1321 357 PRINTS Plant peroxidase signature 77 97 IPR000823 GO:0004601|GO:0006979|GO:0020037
Apr6g1321 357 PRINTS Plant peroxidase signature 137 147 IPR000823 GO:0004601|GO:0006979|GO:0020037
Apr6g1321 357 PRINTS Plant peroxidase signature 156 171 IPR000823 GO:0004601|GO:0006979|GO:0020037
Apr6g1321 357 PRINTS Plant peroxidase signature 202 214 IPR000823 GO:0004601|GO:0006979|GO:0020037
Apr6g1321 357 PRINTS Plant peroxidase signature 254 269 IPR000823 GO:0004601|GO:0006979|GO:0020037
Apr6g1321 357 PRINTS Plant peroxidase signature 270 287 IPR000823 GO:0004601|GO:0006979|GO:0020037
Apr6g1321 357 PRINTS Plant peroxidase signature 310 323 IPR000823 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr6g1321 Apr-Chr6 18793785 18796016 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr6g1321 9 354 Peroxidase AT1G71695 48.011 3.70e-108 319
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr6g1321 K00430 - gmx:100795412 459.529