Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr6g1310 ATGGCTGCCTCAACAATGGCTCTCTCTTCTCCATCATTGGCAGGGCAAGCAATAAAGCATGCCCGATCCACCCCAGAGCTTGGAAGTGGAAGGCTCACAATGAGGAAAGCAGTCACCAAAACTTCTGGAAGCCCATGGTACGGCCCAGACCGTGTCTTGTACTTGGGCCCACTCTCTGGCACTCCCCCATCCTACCTCACTGGTGAATTCCCAGGTGACTATGGCTGGGACACTGCTGGGCTTTCCGCTGACCCAGAGACATTTGCCAGAAACCGCGAACTTGAGGTCATCCACTGCAGATGGGCCATGTTGGGAGCCTTGGGCTGCGTCTTCCCCGAACTCTTGGCCCGCAATGGGGTCAAGTTCGGCGAGGCCGTGTGGTTCAAGGCTGGATCCCAGATATTCAGTGAGGGTGGGCTTGACTACTTGGGCAACCCAAGCCTGATCCATGCACAGAGCATCCTTGCCATCTGGGCCTCCCAAGTCATCTTGATGGGTGCCGTTGAGGGTTACCGTATTGCCGGTGGGCCTCTCGGCGAGGTCACTGACCCACTCTACCCAGGTGGCAGCTTTGACCCATTGGGCCTTGCTGATGACCCAGAGGCTTTTGCTGAATTGAAGGTGAAGGAGATCAAGAATGGTAGATTAGCCATGTTCTCCATGTTTGGGTTCTTTGTTCAGGCTATTGTGACCGGAAAGGGTCCTTTGGAGAACCTCGCTGACCACCTTGCTGACCCAGTCAACAACAATGCTTGGGCCTATGCCACAAACTTTGTTCCCGGAAAGTGA 789 0.5501 MAASTMALSSPSLAGQAIKHARSTPELGSGRLTMRKAVTKTSGSPWYGPDRVLYLGPLSGTPPSYLTGEFPGDYGWDTAGLSADPETFARNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWASQVILMGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK* 263
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr6g1310 262 Pfam Chlorophyll A-B binding protein 62 228 IPR022796 -
Apr6g1310 262 Gene3D Chlorophyll a/b binding protein domain 53 255 - -
Apr6g1310 262 PANTHER CHLOROPHYLL A/B BINDING PROTEIN 1 262 IPR001344 GO:0009765|GO:0016020
Apr6g1310 262 SUPERFAMILY Chlorophyll a-b binding protein 45 259 - -
Apr6g1310 262 PANTHER CHLOROPHYLL A-B BINDING PROTEIN, CHLOROPLASTIC 1 262 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr6g1310 Apr-Chr6 18516161 18517206 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr6g1310 1 262 Chloroplast and Mitochondria Gene Families AT2G34420 87.594 5.69e-168 463
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr6g1310 K08912 - qsu:112030611 502.286