Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr6g1301 ATGGAGAGGGAGGCAGAGATGGAGATGAGAAGCAGCGAAGAAATAGAGATTGGGACAGACATAACTCCAACACTCACTCCTCTTTCTTTCTCTCTCCACACTTCCCGTCTTCAAACTCACTGCTCCACTTGCTTCTCTCCCCTTCCCATTCCCATTCCCTCCAAAACCAATCCCAATTCCCTTTTCTACTGTTCCCCTCCCTGCTCCGCCGCACTTTCATCCCTCCACCTCTCCTCCGCCGAGCGCCACCTCCCTCCCTCCGCCCACTCCTCCGACCACCGCGCCGCCCTCCGCCTCCTCCACTCCCACCGCCCCTCCCCCTCGGGTCGGGTCGCCGGGTTGCTATCTAACAGCAACTTGCTGACGTGTCAAAAAAATCCCTCCTACTCTGACGACGACGTTTCAGAGAGGATCAAGTTTGGCGCCAGCGCCGTGGCCGAAGCGCTAGCGAAGCAGCGCGGCATCCCATTCAACGACGCCGTTTTGGAGGAAGCAACGGTTGCTCTCTGCGCGGTGCTAACGAACGCTGTGGAGGTGCACGATAGCGAAGGGCGCAACCTTGGGATCGCAGTTTATGATCTCACTTTCTCTTGGATTAACCATAGTTGTTCCCCTAACGCGTGCTACCGCTTCGATCTCACTTCTTCGTATTCACCTTCGGATAAACTCAAACTTCGCATTGCTCCCTTCACTCGCCATTCTCAACAACCACAAATGGATAGTGGAGTTTGTAGTAGCAGTTCTGAATTTGTAAAAGAAGGGGAGTTAGGTTATGGTCCAAGATTGATTGTGAGGAGTATCAAAAGAATAAAAAAGGGCGAAGAAGTTACTGTAGCATATACGGATCTCTTGCAACCTAAGGCAATGAGACAGTTGGAGCTGTGGTCAAAGTATCAGTTTATTTGTTGTTGCAAACGATGTAGTGTTCTTCCCTTCACATATGTGGATCATGCATTGCAAGAAATTTCTGTTTCCACTCATGATTCATCTGGTTCATGTTCCGATTATAAGTTCACAAGAGACATGGCTGATAGAAGATTGACTGAGTGCATTGATGATGTTGTATCGGAGTACCTTTCTTCTGGTGATTCCGAGTCCTGTTGTAAGAAGCTTGAGAAGATACTTATGCAAGGTTTAAATGAGCAGTTAGAAGGCATTGAAGGAAAATCAGATTCTAAATTCATGCTGCATCCCCTGCATCACCTCTCTCTAAGAGTGTACACAACACTGGCATCAGCGTATAACGTTCGTGCTAGTGATTTATTGTCTGTAGATTCTCAAATAGATATACATCAGTTTGAAGCTTTTGAAATGAGCAGGACCGGCGCAGCATATTCTTTGTTACTTGCAGGTGCGACTCATCATCTTTTCAATTCTGACTCCTCATTGATTGCATCTGTTGCAAACTTTTGGACAGGAGCCGGTGAATCTTTGTTATCTCTGACCAGAAGTTCTGGATGGAGAAAGTTTGTTAATTTGGGTCCGGTTGTTTCAAACTTTGCTTCTGTCACAAAAGTCAAATGCTCTAAGTGTTCATTAATGGATAGATTTAGAGCCTGTATGCCAAATGGTCACATTAAAAGTACAGATTTTGACAATGTATCAAATGAGTTTCTTCATTGTGTCAGAGCTATTACACTGAATGTTTGGAGTTTCCTTGTCTGTAAGTGCCATTTTTTGAGATCATGTATCAATTTCAGCTGGCTAATGTCTCCCAAAGATCCCAGTACCGTTGATGTTGAGGCGTATGTTAACAAAACTGATATGTGTTACACCCATGAATCTGAAAATAACTTCTGTATTTGTGTAGAGCAAACTTACACTGATCATGCAGTAGCATGCATTTTTCAGCTTGGTGTACACTGCTTAGCCTATGGAGGGTTGTTGGCTAGTATTTGTTATGGTCCCCATTCCCATTTGGCTTGTCATGTCCAAAATATTCTAGATCGTGAAAATAGTTTTGGACTATATTCTCATGAAGAATCTTGA 1989 0.4495 MEREAEMEMRSSEEIEIGTDITPTLTPLSFSLHTSRLQTHCSTCFSPLPIPIPSKTNPNSLFYCSPPCSAALSSLHLSSAERHLPPSAHSSDHRAALRLLHSHRPSPSGRVAGLLSNSNLLTCQKNPSYSDDDVSERIKFGASAVAEALAKQRGIPFNDAVLEEATVALCAVLTNAVEVHDSEGRNLGIAVYDLTFSWINHSCSPNACYRFDLTSSYSPSDKLKLRIAPFTRHSQQPQMDSGVCSSSSEFVKEGELGYGPRLIVRSIKRIKKGEEVTVAYTDLLQPKAMRQLELWSKYQFICCCKRCSVLPFTYVDHALQEISVSTHDSSGSCSDYKFTRDMADRRLTECIDDVVSEYLSSGDSESCCKKLEKILMQGLNEQLEGIEGKSDSKFMLHPLHHLSLRVYTTLASAYNVRASDLLSVDSQIDIHQFEAFEMSRTGAAYSLLLAGATHHLFNSDSSLIASVANFWTGAGESLLSLTRSSGWRKFVNLGPVVSNFASVTKVKCSKCSLMDRFRACMPNGHIKSTDFDNVSNEFLHCVRAITLNVWSFLVCKCHFLRSCINFSWLMSPKDPSTVDVEAYVNKTDMCYTHESENNFCICVEQTYTDHAVACIFQLGVHCLAYGGLLASICYGPHSHLACHVQNILDRENSFGLYSHEES* 663
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr6g1301 662 Gene3D SET domain 140 280 IPR046341 -
Apr6g1301 662 SUPERFAMILY SET domain 173 308 IPR046341 -
Apr6g1301 662 CDD SET_SMYD 134 307 - -
Apr6g1301 662 Pfam SET domain 197 280 IPR001214 GO:0005515
Apr6g1301 662 ProSiteProfiles SET domain profile. 136 281 IPR001214 GO:0005515
Apr6g1301 662 PANTHER PROTEIN SET DOMAIN GROUP 41 7 652 - -
Apr6g1301 662 Gene3D Tetratricopeptide repeat domain 282 420 IPR011990 GO:0005515
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Apr6g1301 SET 6.2e-07 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr6g1301 - - aprc:113867790 1317.75