Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr6g1293 ATGAAGAAATTGTTAGGCTATGTGGCGGTGGTGGAGAAAAATAAACCTTATGTTGCAATGCTGTTTATTCAGTTTGTGTATTCAGGAATGGCTTTGTTATCTAAAGCTGCAATTTCCAAAGGAATGAGTCCTTATGTGTTTGTTGTTTATAGACAAGCCTTTGCATCAATTGCCTTATCTCCTTTTGCTCTCTTTGACAGTAAGCAAGCAGCCCCTTTGTCATGCAACTTATTGTGCAAATTGTTTCTAGTTTCCCTGGTTGGGTTAACAGCAAGCTCAAACCTTTACTATGTTGCAATCAACTACACCTCTGCAACATTTGCTGCAGCCAGCTCAAACACTGTTCCTGCCATTACTTTTATCATGGCTATTTTAATCAGGGTGGAAAGCATTTCCATAAAACATATGCATGGGGTGGCCAAGATTTTGGGATCTATTCTAAGCCTTTCTGGGGCAATTACATTTGCTTTAGTCAAAGGACCATCCTTGGGTTATATGAAATGGTATCCAGAAAATCCGAACCATAGTTCTCACCCATTAACGGTTCACTCCAAAGGTGATAACATTAGAGGCTCTCTTATGATGCTCTTGGCAAACACTTCATGGTCCTTGTGGCTTATCTTGCAGGGATTTGTGGTAAAGCAATACCCAGCAAAATTTCGCCTCACTACTCTACAATGCTTCTTTAGCTTCATGCAGTCTGCTGTTTTGGCTGCTGCAATGGACAGGAATAATCCTTCAGCATGGAAGCTTGGATGGGATATTCATCTTCTTTCTGTGGCCTACTGTGGTGTAATTGTAACAGGCGTTTGTTATTGGCTGCAAGTCTGCACTATAGAGGCCAAAGGCCCAGTTTTCACAGCAATGTTCACCCCTCTAGCTCTTATAATCACAGCAATATTCTCAGCCCTTTTGTGGAAAGAAACACTTTACTTGGGAAGTGTTGGTGGCACTATTTTACTGGTAGTTGGACTCTACAGTGTCCTATGGGGGAAGAACAAGGAGAGTGTAAAGGAAGAAAGCATAGAAGCTGAACAAGCAAGAGAGGAAACCAAATTGGAGTGCATCATCCAGCACTGA 1080 0.4176 MKKLLGYVAVVEKNKPYVAMLFIQFVYSGMALLSKAAISKGMSPYVFVVYRQAFASIALSPFALFDSKQAAPLSCNLLCKLFLVSLVGLTASSNLYYVAINYTSATFAAASSNTVPAITFIMAILIRVESISIKHMHGVAKILGSILSLSGAITFALVKGPSLGYMKWYPENPNHSSHPLTVHSKGDNIRGSLMMLLANTSWSLWLILQGFVVKQYPAKFRLTTLQCFFSFMQSAVLAAAMDRNNPSAWKLGWDIHLLSVAYCGVIVTGVCYWLQVCTIEAKGPVFTAMFTPLALIITAIFSALLWKETLYLGSVGGTILLVVGLYSVLWGKNKESVKEESIEAEQAREETKLECIIQH* 360
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr6g1293 359 SUPERFAMILY Multidrug resistance efflux transporter EmrE 253 334 - -
Apr6g1293 359 PANTHER WAT1-RELATED PROTEIN 13 339 IPR030184 GO:0016021|GO:0022857
Apr6g1293 359 PANTHER WAT1-RELATED PROTEIN 13 339 - -
Apr6g1293 359 SUPERFAMILY Multidrug resistance efflux transporter EmrE 50 149 - -
Apr6g1293 359 Coils Coil 334 354 - -
Apr6g1293 359 Pfam EamA-like transporter family 190 329 IPR000620 GO:0016020|GO:0016021
Apr6g1293 359 Pfam EamA-like transporter family 16 149 IPR000620 GO:0016020|GO:0016021
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr6g1293 Apr-Chr6 18096853 18100247 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr6g1293 11 354 Nodulin-like Gene Family AT2G37460 35.362 1.10e-81 252
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr6g1293 - - gsj:114390241 608.601
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr6g1293 6 18096853 18100247 Apr6g1293 6 18096853 18100247 ECH