Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr6g1277 ATGGGATCCCTGAGCCCAGCCAAAATTGTCCTTCCAAACAATGACCTTGAGCAACAAACAATAACAACAACTCTAGAGATTGAAACCAAGGACTTTGACTACTCAAAAAGATCTCAATGGCTACGTGCTGCTGTTTTGGGAGCCAATGATGGGTTGGTCTCAACAGCATCTCTTATGATGGGTGTTGGAGCAGTCAAACAGGACATTAAGGCCATGATCTTAACTGGCTTTGCAGGGTTGGTGGCAGGAGCATGTAGTATGGCCATAGGGGAGTTTGTGTCTGTGTATTCACAATTGGACATAGAGGTTGCTCAAATGAAGAGAGAGAAAGAAAGGGAGCATGGTGGTGGAGAACGTGAAGATGCTAATGATGAAGAGAAAGAGAGTTTGCCAAACCCTTTACAAGCTGCAGCAGCCTCAGCTTTAGCCTTTTCTGTTGGTGCAATAGTGCCATTGCTTGCAGCTTCTTTTATAAGGGAATATAAGGTGAGGCTTGGTGTGATTGTGGCTGCTGTAAGCTTTGCTTTGGTTGTGTTTGGTTGGTTAGGTGCTGTGTTGGGCAAGGCTCCAGTATTGAGGTCTTCTGTGAGGGTCTTGCTTGGGGGTTGGATGGCCATGGCCATTACTTTTGGGCTAACAAAGTTGATTGGATCAAGTGGACTTAATTAG 669 0.4544 MGSLSPAKIVLPNNDLEQQTITTTLEIETKDFDYSKRSQWLRAAVLGANDGLVSTASLMMGVGAVKQDIKAMILTGFAGLVAGACSMAIGEFVSVYSQLDIEVAQMKREKEREHGGGEREDANDEEKESLPNPLQAAAASALAFSVGAIVPLLAASFIREYKVRLGVIVAAVSFALVVFGWLGAVLGKAPVLRSSVRVLLGGWMAMAITFGLTKLIGSSGLN* 223
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr6g1277 222 Pfam VIT family 41 114 IPR008217 GO:0005384|GO:0030026
Apr6g1277 222 Pfam VIT family 126 213 IPR008217 GO:0005384|GO:0030026
Apr6g1277 222 MobiDBLite consensus disorder prediction 107 130 - -
Apr6g1277 222 CDD Nodulin-21 39 190 - -
Apr6g1277 222 MobiDBLite consensus disorder prediction 107 128 - -
Apr6g1277 222 PANTHER VACUOLAR IRON TRANSPORTER HOMOLOG 2.1 21 218 - -
Apr6g1277 222 PANTHER FE(2+)/MN(2+) TRANSPORTER PCL1 21 218 IPR008217 GO:0005384|GO:0030026
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr6g1277 Apr-Chr6 17633074 17634899 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr6g1277 13 221 Nodulin-like Gene Family AT3G43660 72.727 1.15e-103 296
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr6g1277 K22736 - zju:107406772 333.183
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr6g1277 6 17633074 17634899 Apr8g2120 8 31752868 31753536 PCT