Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr6g1276 ATGGATGCGCAAGCCAAAAAAAAAGCTCTGTTTCGTGCTAAATTGAATGCCCAGAAGAAGGAAAAACGCATAGAGTCTCCTCTTGTGAGGTATAATGAATTTGATCAACCTGTTTGTCGGGTTTGTGATGTTGTTCTAAAGTCTGAGTCTTTATGGGATGCGCACCAAGTTTCTCGTAAGCATCGTGAGGTGATGATGTCAACAATCTTGTTCATGTTATTTGCAATAAGTAATTTGAAAGCTAATGCTACTGGATCAACTCAGCACAAAAGTGCTAAGCCTGGTACTGATACCTCCAAGACTAAACTAGAACAGCCATCAGACTCACAATCCAAACTTCCAGATGGTTCACAAGAAGTGCCTAAACCTCAGTCATCATCGGTGCTTCCACCAGGTTTTTTTGATGACAGTGATGCAAGAAAGATAAGATCTGAGAAGGAGTCTTTCCATTTAGTGGACTCTGATTCAGGTAGAAAAGTGGGACTTTCTGCTCAAAGTCAGGTGTTAAACTTGGATGAGAAAGGTCATTTCGGTGGCAATGATGCTGCAAAGTCAAATGTTGATCAAACAACAACAGGGATTAGGCAGACATCAGTTAAGGCTACTGATACAGAGATCAAGCAAGTAAAAGGGATTCTGCCCGAAGGATTTTTTGACAGCAAGGAAGCTGATTTACGCGCACGTGGGATCAAGCCTGTTAAACCAGATATCAAAGATGAGTACAAGGAATTTGAGAAGTTGATTCAAGAAGACTTGCAGCAGGTGGATGACCGGTTTGAAGAAGAAGAGATTGATGCTGCTGAAATGATAGAAGAAGCTGAATCTGTGGAGCAAAAGATCCTTAGGGAGAAGGTGGAAATGTTGAAGAAGAGGAGATTGGAGCTAAAGGCTGCTAAGTCTACAAAGCATAGTAAATCATCTGAGGTTGTAACAAAGGAGCCCAGACACGAAGAGTCGTCCAGTGATGATGAAAGTGGTGAGAATTTTGCTGTGGACTGGAGAGCACAACACTTGTGA 1017 0.4199 MDAQAKKKALFRAKLNAQKKEKRIESPLVRYNEFDQPVCRVCDVVLKSESLWDAHQVSRKHREVMMSTILFMLFAISNLKANATGSTQHKSAKPGTDTSKTKLEQPSDSQSKLPDGSQEVPKPQSSSVLPPGFFDDSDARKIRSEKESFHLVDSDSGRKVGLSAQSQVLNLDEKGHFGGNDAAKSNVDQTTTGIRQTSVKATDTEIKQVKGILPEGFFDSKEADLRARGIKPVKPDIKDEYKEFEKLIQEDLQQVDDRFEEEEIDAAEMIEEAESVEQKILREKVEMLKKRRLELKAAKSTKHSKSSEVVTKEPRHEESSSDDESGENFAVDWRAQHL* 339
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr6g1276 338 MobiDBLite consensus disorder prediction 84 137 - -
Apr6g1276 338 Coils Coil 252 298 - -
Apr6g1276 338 PANTHER UNCHARACTERIZED 1 338 IPR040050 GO:0003676|GO:0005681|GO:0008270
Apr6g1276 338 MobiDBLite consensus disorder prediction 296 330 - -
Apr6g1276 338 Pfam Zinc-finger of C2H2 type 39 61 - -
Apr6g1276 338 SUPERFAMILY beta-beta-alpha zinc fingers 34 64 IPR036236 -
Apr6g1276 338 MobiDBLite consensus disorder prediction 296 338 - -
Apr6g1276 338 Gene3D Classic Zinc Finger 32 68 - -
Apr6g1276 338 MobiDBLite consensus disorder prediction 84 125 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr6g1276 Apr-Chr6 17612382 17617024 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr6g1276 1 338 C2H2 Transcription Factor Family AT3G02860 51.862 5.75e-90 270
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr6g1276 K13104 - gmx:100808515 450.669