Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr6g1274 ATGATACTCTTAAAGACCACTCGCCAAAGACACTTCCCTCAACTTTTGGTAAATAAAGTCAAATTGCTTGTCTCTTCCAATTGTTTCTCCCTACTAAACTCACAAAAACGCACCACAACAACCTCAACAACCACCCTCTCTTCTCTCACAACACCACCACCACCACCACCAACGCAAAATAAAAATAAAATAAAAGAAAAACAAGATTTGTTTTTTTTTTTTTCGATGGACCCCAAGTTCATCGGAAAACCGCCGGCGACGGTGGACATAGAGCGCATGCCGGAGCGTGGGTCCCACCACCGGCGTTCTCACTCCGACACCTCTTTCCGTTTCGCCGCCAACTTCGACGACCTTCTCCTCTTCGACCCTTCCGACCTTGACATCTCCAACCTTCCTTCGCCACTCCCCCTTCCTTCTCCGGCTGCTGCCGGCGTCGTTCCGATGGCCGTCGATTCTGATGAGTCCGGCGGGCGGCCCAGGCCTGCCGGTAACTCTGCCGGCGGCCACCTCCGGAGCTTGTCCGTGGATTCTGACTTCTTTGACGGCCTCGGATTCTCCGCCAGCGGTGAGGAGAAAGTCGCCGGAAAGAGTGCCGGCGAGCGAAGGGTGGGGCATCACCGGCACAGTAATTCAATGGACGGGTCCTCGACGACGTCGTTCGAGGCTGACTCGTCGATGGTGATGATAGACGGTGTGAAGAAAGCCATGGCTCCTGATAAACTCGCTGAGCTTGCTCTTATTGATCCCAAGAGAGCAAAGAGGATTCTTGCTAATAGGCAATCTGCTGCTCGATCGAAGGAGAGGAAGATTCGATACACAAGTGAGTTGGAGAGGAAGGTGCAGACGCTTCAGACCGAAGCAACTAACCTCTCTGCACAGCTTACCATGCTTCAGAGAGACACTACGGATTTGACTGCGGAGAATAAGGAGCTAAAAATGCGGCTAGAGGCTTTGGAGCAAGAAGCACAGCTTAGAGAAGATCTAAATGAGGCATTGAAGGAAGAACTGCAGCGCCTCAGGGCACAAAGTAGCCGTTTGGGTGCTATTGCTAGTAACCCTTCTTTTGGTGGGCTATTCAACCAGTTGGCTTCTCAGTTAGCCATGCAACAGTTGAACAATTCTCCTCCTCAGCAGGCACAACAGCAGCCACAGGTTGGCATGCCTCCCCCTCCCTCAGATCAACCTTTCAACGGGCCGAACCGCTCGAACTTCATAGACTTCAATCAGCAGAAGTAG 1236 0.5202 MILLKTTRQRHFPQLLVNKVKLLVSSNCFSLLNSQKRTTTTSTTTLSSLTTPPPPPPTQNKNKIKEKQDLFFFFSMDPKFIGKPPATVDIERMPERGSHHRRSHSDTSFRFAANFDDLLLFDPSDLDISNLPSPLPLPSPAAAGVVPMAVDSDESGGRPRPAGNSAGGHLRSLSVDSDFFDGLGFSASGEEKVAGKSAGERRVGHHRHSNSMDGSSTTSFEADSSMVMIDGVKKAMAPDKLAELALIDPKRAKRILANRQSAARSKERKIRYTSELERKVQTLQTEATNLSAQLTMLQRDTTDLTAENKELKMRLEALEQEAQLREDLNEALKEELQRLRAQSSRLGAIASNPSFGGLFNQLASQLAMQQLNNSPPQQAQQQPQVGMPPPPSDQPFNGPNRSNFIDFNQQK* 412
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr6g1274 411 Coils Coil 273 349 - -
Apr6g1274 411 MobiDBLite consensus disorder prediction 190 219 - -
Apr6g1274 411 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 248 311 IPR004827 GO:0003700|GO:0006355
Apr6g1274 411 PANTHER TRANSCRIPTION FACTOR POSF21-RELATED 84 392 - -
Apr6g1274 411 SUPERFAMILY Leucine zipper domain 250 302 IPR046347 GO:0003700|GO:0006355
Apr6g1274 411 Gene3D - 249 301 - -
Apr6g1274 411 MobiDBLite consensus disorder prediction 367 381 - -
Apr6g1274 411 SMART brlzneu 246 310 IPR004827 GO:0003700|GO:0006355
Apr6g1274 411 PANTHER BASIC-LEUCINE ZIPPER (BZIP) TRANSCRIPTION FACTOR FAMILY PROTEIN-RELATED 84 392 - -
Apr6g1274 411 MobiDBLite consensus disorder prediction 382 396 - -
Apr6g1274 411 MobiDBLite consensus disorder prediction 367 411 - -
Apr6g1274 411 MobiDBLite consensus disorder prediction 397 411 - -
Apr6g1274 411 MobiDBLite consensus disorder prediction 40 62 - -
Apr6g1274 411 CDD bZIP_plant_RF2 251 300 IPR044759 GO:0003700|GO:0006355
Apr6g1274 411 MobiDBLite consensus disorder prediction 194 209 - -
Apr6g1274 411 Pfam bZIP transcription factor 250 308 IPR004827 GO:0003700|GO:0006355
Apr6g1274 411 MobiDBLite consensus disorder prediction 150 169 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr6g1274 Apr-Chr6 17562602 17567000 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr6g1274 89 388 bZIP Transcription Factor Family AT1G43700 51.385 1.99e-82 254
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Apr6g1274 bZIP_1 8.3e-08 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr6g1274 K20557 - gmx:778142 483.026