Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr6g1237 ATGTCAAGGTTTAATGGGGAGAAGAAGCTCGGTGCAGGACGTGTGGTGGCTGTAGCTATTGATAATAGCAAAACAAGCCAACACGCTGCAAAATGGGCCGTGGACAATCTTCTTCCCAAAGACCAATGTCTCTATCTAATTCATGTTAGACAGAAAGCATCTTCGGCTCCCACATCATCGGGAAACCACGCCATCGAAGGGAACGAAGCTGTGGCCGACAACGAATCCAAGGAACTTTTTGATTCATTTCGTGTCTTCTGCAACAGAAAAAGTATACAGTGCAAAGAAGTGTTGTTGGAGGACACGGATGTATCTAAGGCATTAATTGACAGCATTTCCACGTATTCCATCGAGCTTCTGGTGCTTGGGGCGCCATCAAAGGGGGGCCTTGTTAGAAGATTTAGGACAACGGATGTTCCAAGCATTGTGTCAAAAGGAGCGCCACCATTCTGCACGGTTTATATAATTTCTAAAGGAAAAATCTCAAGTGTGAGATCTGCAACTGCTCCGTTGCCTAAAACCGCACCTCGGAACCAATTGCAACCACAGCCACAACCACAACCACAATCACAGCCAATCCCAAGTCCTGAAAGAATGATGGATCCTCAGGGCTCACGCAACTACCCAGTGCCACCAAGACAGCAAAAGCCAGCATATGGATCACGCTTGGGGCTGGATGATGATGACATCATATCACCGTTCACAAGAATTGGCAAAACATATGAGCCCTCAAAACTTGCGGATTCAGATATATCATTCGTGAGCAGTGGAAGGCCAAGCATTGATCGAATGTTCCCATCATTGTATGATGATTTGGACAGTGCTAATTATGGAATGGCTCCAGCTAGGCTTTCATGTGGCTCCGATTTTGATTCCAGAAGCTTCGCCTCATCTCTCTCAGGAGCTAATAACATGGAGGACTTCTCATTCACCTCACAAGGCAGTGGCTTATTATCATCAAGGCTATCCGACAGTAACCCGGATGAAATGGAAGCGGAGATGAGGAGGCTGAAGCTGGAACTGAAGCAGACAATGGAAATGTACAGCACAGCATGCAAGGAAGCTCTGACGGCAAAGCAGAAGGCGATGGAACTTCAAAGATGGAAAGTGGAAGAACAGAAGAAAATGGAAGAGGCGAGAATGGGGGAAGAGGCAGCCATGGCAATGGTGGAGATAGAGCAGGAGAAGTGCAGAACTGCGTTGAAGACGGCAGAAACATCCCAAAGAATAGCGACGTTAGAAGCACAAAAGAGAATGAATGCAGAGATGAAGTGCCAAGCAGAGAGGATGAAGACAGAGAGCGGTTTTGGACACGGCACTACAAGGTACAGAAGATACACTATCGAGGAAATTGAAGAGGCCACAAATCGCTTTTCGGATTCCCTCAAGATCGGCGAAGGAGGTTATGGCCCCGTCTATAGGTGTGAACTTGATCACACTCAGGTTGCCATTAAAGTTTTGAAGCCAGATGCACAACAAGGACGCGAGCAGTTTCAGCAGGAAGTTGAAGTGTTAAGTTGCATAAGGCATCCAAACATGGTTCTGCTGCTAGGAGCATGCCCAGAGTATGGATGCTTAGTGTATGAGTACATGGCTAATGGAAGTTTGGATGATTGTCTGTTCAGGAGAGGTAAGCCGCGTCCACCTCTTCCATGGCAGCTAAGGTTTCAAATTGCAGCAGAGATAGCGACAGGGCTTCTTTTCCTTCATCAAACAAAGCCAGAGCCATTGGTTCACCGAGACTTAAAACCAGGAAACATTCTTCTTGACCGAAACTATGTGAGCAAGATCAGTGATGTGGGGTTGGCAAGGCTTGTCCCTCCTTCAGTTGCTGACACTGTTACTCAGTATCGCATGACATCAACTGCTGGAACCTTCTGTTACATTGATCCTGAGTATCAGCAAACGGGCATGCTTGGAATCAAATCTGATATTTACTCGTTGGGAATCATGCTTCTTCAGTTGGTTACGGCTAAGCCACCAATGGGTTTGACCCATCATGTTGGAAAGTCCATTGAGAAGGGTACTTTTGCTGAGATGCTTGATCCTGCTATTGAGGACTGGCCACTAGAACAAACCTTGCATTTCGCCAAACTATGCCTTCAATGTGCTGAAATGAGGAGAAAAGATAGGCCTGATCTTGGGAAAGTTGTGTTACCAGAACTCAACAAACTCAGAACCTTTGCTGAAGAAAGCATGCCTCCTATGATGATGTTTGGACTTGGAAGTGGTGCTGCATTCGCTCCAAGAACCAGCAACTCTTCCAACCACTCCGCAGTTTCTTCCACTTCTCAAGACAATATGAGTGAATCTCAATCACTGTCTGGCATCTCCGGATATGAAAGCCGCTCGAGTACATCATCACTGGGGAGAATGTGA 2379 0.4653 MSRFNGEKKLGAGRVVAVAIDNSKTSQHAAKWAVDNLLPKDQCLYLIHVRQKASSAPTSSGNHAIEGNEAVADNESKELFDSFRVFCNRKSIQCKEVLLEDTDVSKALIDSISTYSIELLVLGAPSKGGLVRRFRTTDVPSIVSKGAPPFCTVYIISKGKISSVRSATAPLPKTAPRNQLQPQPQPQPQSQPIPSPERMMDPQGSRNYPVPPRQQKPAYGSRLGLDDDDIISPFTRIGKTYEPSKLADSDISFVSSGRPSIDRMFPSLYDDLDSANYGMAPARLSCGSDFDSRSFASSLSGANNMEDFSFTSQGSGLLSSRLSDSNPDEMEAEMRRLKLELKQTMEMYSTACKEALTAKQKAMELQRWKVEEQKKMEEARMGEEAAMAMVEIEQEKCRTALKTAETSQRIATLEAQKRMNAEMKCQAERMKTESGFGHGTTRYRRYTIEEIEEATNRFSDSLKIGEGGYGPVYRCELDHTQVAIKVLKPDAQQGREQFQQEVEVLSCIRHPNMVLLLGACPEYGCLVYEYMANGSLDDCLFRRGKPRPPLPWQLRFQIAAEIATGLLFLHQTKPEPLVHRDLKPGNILLDRNYVSKISDVGLARLVPPSVADTVTQYRMTSTAGTFCYIDPEYQQTGMLGIKSDIYSLGIMLLQLVTAKPPMGLTHHVGKSIEKGTFAEMLDPAIEDWPLEQTLHFAKLCLQCAEMRRKDRPDLGKVVLPELNKLRTFAEESMPPMMMFGLGSGAAFAPRTSNSSNHSAVSSTSQDNMSESQSLSGISGYESRSSTSSLGRM* 793
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr6g1237 792 SMART serkin_6 458 729 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr6g1237 792 SUPERFAMILY Adenine nucleotide alpha hydrolases-like 16 137 - -
Apr6g1237 792 ProSitePatterns Serine/Threonine protein kinases active-site signature. 577 589 IPR008271 GO:0004672|GO:0006468
Apr6g1237 792 Pfam Universal stress protein family 14 134 IPR006016 -
Apr6g1237 792 PANTHER ADENINE NUCLEOTIDE ALPHA HYDROLASE-LIKE DOMAIN KINASE 1 792 - -
Apr6g1237 792 Coils Coil 413 433 - -
Apr6g1237 792 CDD STK_N 15 159 - -
Apr6g1237 792 Gene3D Transferase(Phosphotransferase) domain 1 531 734 - -
Apr6g1237 792 PANTHER OS02G0152300 PROTEIN 1 792 - -
Apr6g1237 792 MobiDBLite consensus disorder prediction 170 225 - -
Apr6g1237 792 Gene3D Phosphorylase Kinase; domain 1 438 530 - -
Apr6g1237 792 Pfam Protein kinase domain 461 714 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr6g1237 792 SUPERFAMILY Protein kinase-like (PK-like) 439 718 IPR011009 -
Apr6g1237 792 ProSiteProfiles Protein kinase domain profile. 458 722 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr6g1237 792 MobiDBLite consensus disorder prediction 750 792 - -
Apr6g1237 792 MobiDBLite consensus disorder prediction 177 195 - -
Apr6g1237 792 Gene3D HUPs 14 156 IPR014729 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr6g1237 Apr-Chr6 16827951 16831719 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr6g1237 16 733 Receptor kinase-like Gene Family AT5G35380 58.127 0.0 748
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-IXb Apr6g1237 Pkinase 1.1e-40 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr6g1237 - - gmx:100801947 1110.52
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr2g1321 2 19390921 19395443 Apr6g1237 6 16827951 16831719 PCT