Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr6g1230 ATGAAGAACTTTCCCTACTACACTAAAAACCAACCTCAACTTTGTAGTTTTTTACCACACATCTTCAACTTCCTTGGACCCTTGACTCGTTTTGTAGCCTTCCAATTCCACCCCTTCCTTATTCAACTTTGTTATTTTGTGATTCTTTCCCTTTTTGGTTACCTGGGTCTTAAGCTCTCAAAGCCAAGAACCCCTGTTAGGCCCAATGACTTCGACCTGTTTTACACCTCTGTTTCTGCTTCCACTGTTTCAAGCATGGTAGCCGTAGAAATGGAGGTTTTCTCCAACTCCCAACTGATTCTCCTCACCATTCTCATGTTAGTTGGTGGGGAAGTCTTTACTTCCATGCTAGGCCTTGTGTTAACTAGGTATACATTTACCCAAAATATTCATCATGACAAAAACGAAGTTTGCACTAGTACCTTTTCATCGACAAAGGAGTCCACAAATAATGCCACCAATCAAATTGAGCTTGGTTTAGTTTCTATTCCTCAGTTAGAATCAGAAAACCACCTGCATAGTGATATAGACAGGCTTAAGTATAACTCTCTTAGGTATCTAATACATGTAGTTTTAGGTTACCTGATGGTGGTCCAATTTGTTGGTACTAGTTTGGTCTCTTTGTACCTAATTTTCATAGCGAGTGCGAGAGAAGTGCTGAGAAGCAAAGGCATTAAAATACTAACATTTAGTTTGTTTACCGTAGTGTCTACTTTTGCTAGTTGTGGCTTTGTGCCCACCAATGAGAACATGATAGTTTTCAAGAAGAATTCGGGGATTCTACTCCTTATTCTGCCACACATATTTCTTGGTAACACCCTTTATGCACCGTGTTTGAGGCTTGTGATAATGGTTCTGAAAAAGGTTACCAAAAGAGAGGAATTCTCGTACTTGTTGGACAATTTTAAGGACATGGGCTATGATCACTTGTTGTCTGGTCTTCATTGTTGCCTCCTAGTTGCTACTGTGTTGGGTTTTAATCTGATACAATTAGTGATGTTGTGCTGCATGGAGTGGAACACCAAGAATATGGAGGGTCTAAGTCTCTATGAGAAACTGGTTGCGTCTTTGTTTCAAGTATCAAATGCAAGACATGCTGGTGAATCGGTTTTTGATCTCTCCGCCATCTCTTCAGCCATATTGGTGCTCTTCGTTGTCATGATGTACCTCCCACCATACACTACATTTTTACCTGTAAGGGACCACAAAAATGATGTCAAGAGAGACCAAAAAAGTCTAGTGGAGTGTCTTGTATTCTCTCAACTCTCTTACTTGGTTATTTTCATTATTCTGATTTGCATCACTGAGAGCAAAAGCTTAAAAGAGGATCCCCTCAACTTTAATGTGTTGAACATCACCCTAGAAGTTATCAGTGCGTATGGGAACGTAGGGTTCTCAACGGGATACAGCTGCGCAAGGCAATTGAAACCCGAAGCTATGTGCAAGGATTCATGGGTTGGATTTTCCGGTAGGTGGAGTTCTGAAGGCAAGTTCATCCTTATCTTGGTCATGTTCTTTGGGAGGCTCAAGAACTTCAACATGAAAGGTGGCAAAGCGTGGCACCTCTCCTAG 1572 0.4109 MKNFPYYTKNQPQLCSFLPHIFNFLGPLTRFVAFQFHPFLIQLCYFVILSLFGYLGLKLSKPRTPVRPNDFDLFYTSVSASTVSSMVAVEMEVFSNSQLILLTILMLVGGEVFTSMLGLVLTRYTFTQNIHHDKNEVCTSTFSSTKESTNNATNQIELGLVSIPQLESENHLHSDIDRLKYNSLRYLIHVVLGYLMVVQFVGTSLVSLYLIFIASAREVLRSKGIKILTFSLFTVVSTFASCGFVPTNENMIVFKKNSGILLLILPHIFLGNTLYAPCLRLVIMVLKKVTKREEFSYLLDNFKDMGYDHLLSGLHCCLLVATVLGFNLIQLVMLCCMEWNTKNMEGLSLYEKLVASLFQVSNARHAGESVFDLSAISSAILVLFVVMMYLPPYTTFLPVRDHKNDVKRDQKSLVECLVFSQLSYLVIFIILICITESKSLKEDPLNFNVLNITLEVISAYGNVGFSTGYSCARQLKPEAMCKDSWVGFSGRWSSEGKFILILVMFFGRLKNFNMKGGKAWHLS* 524
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr6g1230 523 PANTHER SODIUM TRANSPORTER HKT1 3 523 - -
Apr6g1230 523 PANTHER POTASSIUM TRANSPORT PROTEIN DDB_G0292412-RELATED 3 523 - -
Apr6g1230 523 Pfam Cation transport protein 166 390 IPR003445 GO:0006812|GO:0008324|GO:0055085
Apr6g1230 523 Pfam Cation transport protein 418 474 IPR003445 GO:0006812|GO:0008324|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr6g1230 Apr-Chr6 16776437 16780145 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr6g1230 58 522 Inorganic Solute Cotransporters AT4G10310 52.092 2.79e-162 469
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr6g1230 K24976 - gmx:100797835 778.089