Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr6g1229 ATGAATATGTTCGCTTCTTTTGGCAAAAAGCTGCGACATTTTTGTAGCGTTTCAACTCAGAAAATCTCTTGTCTTAGCAAATCAATTGTTTTCTTACAAACATGTTTTTTTCGCTTGCTTCTCCGCAGAGCCAACCCGCTATGGGTTCAAATTGTCTATTTTGTGTCCCTTTCTACGTTGGGTTTTGGGGTTCTCAAGGCTCTTAAGCCCAGAACAGGACCATCTTTTATTCCCAAAAACATAGATTTGTTCTTCACCTCTGTGTCAGCAACAACTGTTTCAAGCATGGCCACGCTTGAAATGGAGGTTTTTTCCGACACCCAGTTAATCATTATGACCATCTTGATGTTCATAGGTGGTGAGATCTTTACCTCTATGGTAGGACTCCATTTCTCTAGGTTCAGGTTCAAAACCGCATTAGATCAAATCGCTTCTTCTCATGCAAGTCTTAGTTCTCCAAATCTTGTTGATCAGATTGAACTGGGCATGGTCACAAATGATAATTCTAATAAATCCTCCACTGTCCACAATCAATCTTTGGGTGCTACAAGTGAAAATTTGAGGTATTTATCAATGAAATATTTGGGCTTTGTGGTTCTAGCTTACCTTGTACTTGTCCACATGACAGGGGTGGTTGCGGTGACCCTTTACCTGGTTGCTATTCAAAGTGCTAAAGAGGTACTAAACAACAAGGGACTCAACATGTTCACATTCTCCGTTTTCACGGCAGTTTCAACTTTTTCTGGCTGTGGCTTTGTTCCAACAAACGAAAACATGGTTGTGTTTAGGAAGAATTCAGGTCTTCTTCTTATGCTTATTCCTCAAGTCCTTCTTGGGAACACGTTGTTCCCTCCTTGCTTGCGGTTTTCAATATGGGTTTTGGGGAAATTTCACAAGAAAAAAGAGTGTAAGTACCTTCTGAAGAATACACAAGAGGTTGGGTACAAACACTTGCTTCCAGGACGCTACTCAGTTTTTCTAGTACTCACTGTTTTTGGGTTTATTCTGCTACAAGTTATACTATTTTGCGCAATGGATTGGAGTGCAGAACCTCTGAAGGGGTTGAATGCATATCAGAAATTCATTGGCGTTTTGTTCCAAAGCGTTAATTCAAGACACACAGGAGAAACCGTTGTGGACTTGTCAATCATATCCCAGGCCATCTTGCTATTATTTGTGGTGATGATGTACCTTCCTCCGTACACGTCTTTCCTTCCAATGAAAGATGAGGGGCAGGATTCAGAAAGTTATGAGAGGATGAAAAAAAGAAGAGGGAAAATTGTGGAGAATTTGATGTTCTCTCAACTCTCCTATTTAGTGATATTTATCATACTCGTCTGCATAACTGAGAGGGAAAAATTGAAGGAGGATCCACTCAATTTCAGCGTCCTCAATATTGTCGTTGAAGTTACCAGTGCATATGGAAACGTAGGATTTACTACAGGATACAGTTGTGAACGACAATTGCATACACAAGCAAACTGCCAAGACAAGTGGATTGGATTTGTGGGCAAATGGAGCAATGAGGGAAAGATCATTCTCATATTTGTCATGTTTTTTGGAAGACTCAAGAAATTCAATATCAATATGGATGGAGGGAAGGCATGGAACCTCCTCTGA 1620 0.4037 MNMFASFGKKLRHFCSVSTQKISCLSKSIVFLQTCFFRLLLRRANPLWVQIVYFVSLSTLGFGVLKALKPRTGPSFIPKNIDLFFTSVSATTVSSMATLEMEVFSDTQLIIMTILMFIGGEIFTSMVGLHFSRFRFKTALDQIASSHASLSSPNLVDQIELGMVTNDNSNKSSTVHNQSLGATSENLRYLSMKYLGFVVLAYLVLVHMTGVVAVTLYLVAIQSAKEVLNNKGLNMFTFSVFTAVSTFSGCGFVPTNENMVVFRKNSGLLLMLIPQVLLGNTLFPPCLRFSIWVLGKFHKKKECKYLLKNTQEVGYKHLLPGRYSVFLVLTVFGFILLQVILFCAMDWSAEPLKGLNAYQKFIGVLFQSVNSRHTGETVVDLSIISQAILLLFVVMMYLPPYTSFLPMKDEGQDSESYERMKKRRGKIVENLMFSQLSYLVIFIILVCITEREKLKEDPLNFSVLNIVVEVTSAYGNVGFTTGYSCERQLHTQANCQDKWIGFVGKWSNEGKIILIFVMFFGRLKKFNINMDGGKAWNLL* 540
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr6g1229 539 Pfam Cation transport protein 170 494 IPR003445 GO:0006812|GO:0008324|GO:0055085
Apr6g1229 539 PANTHER POTASSIUM TRANSPORT PROTEIN DDB_G0292412-RELATED 26 538 - -
Apr6g1229 539 PANTHER SODIUM TRANSPORTER HKT1 26 538 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr6g1229 Apr-Chr6 16768215 16771000 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr6g1229 66 538 Inorganic Solute Cotransporters AT4G10310 49.588 4.17e-153 446
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr6g1229 K24976 - twl:119997267 647.891