LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Apr6g1216	ATGGTAGCTTTGGAGATCACCAGATTGAAGAGGGAGCAATGCAACCGCACAAAACACGATTCTAACTTCTCCCGCTGGAAGATTCTGATTGGCCCTTGTGATTGGAAAGACTATTCCAAAGGAAAGGAAGGATGCGGAAGATACAGGATTCATAACCTTCCACAAAAATCGGGTCCAGGAGTGTATGAGCTTGGAATAGGTGTGTCAGGTAGCGGTTTGGGGCGTGAAATTTACAAGCTTGGCCCTGATTCTCACTCCATAGTTGTAGTTTACCTTGGACAAGCTGACAATGTGAGAGCAAGGCTCCAGCGTTATGGCAGAAGTGGGGCTCATTTGGATGATTCTTCTCTCCAAAAGGGTCGCCCCTTGTTTCAGGAGATTTTTTCACATGGTTTCTCAATTGTTTATAGATGGGCTCCTATGCAAAATAAGGAAGATGCCCTGCGAACTGAAGCTCAGCTGCTCAGTACATTTGATTATGCATGGAACACAAGCAATAATGGTATCCGGCGGCCTGATGATATTCTTCAAAAGCTCCTCAAAATTGCTTCAGGCACTAGAACATTTTCAGATATGGCCAGAGCACTTTTACCTTTCAGTTTCACTCAGAAGCAAGTTGGTATCCGAATCAAATCAAGCAAACTACCTCTGGCAGATGACAAATTAGATGCAGCAGACAATGGCAGCTATAATTTCCTATCTCGAGTATTCAGCTTTAACAGATCACGTCCTAGGATAGTTCAGGAGATCACTGGCATCATTCAGGATCAAGAGAGTGCTAAAATTTGTGGAGTGGCATTGGGTGATGGTTCAATTTGTAGAAGGCCTCCAGCTGATAAAAGAGTGCGGTGTCCTCAGCACAAAGGAATGAGAACAAATGTGTCCACTGCCAAAGCAAGGGCACCTAAGTCAGAGAGCACTGTGGCCAATGGATACAGATACCAAAATGTCAGCCATGATTTAGAAGATCCTTCACAAACAGAGATTGAGAGTCCTGCTGATGAGAGTATCACAAAAGCCAATATATGTGGAATCATATTGAATGATGGTTCCACTTGTAGAAGACAACCAGTCAAAGGAAGAAAAAGGTGCCCTGAGCACAAAGGGAAGCGAATTCGTGCATCTATTGGTGTAAATCAGAAATAA	1146	0.4372	MVALEITRLKREQCNRTKHDSNFSRWKILIGPCDWKDYSKGKEGCGRYRIHNLPQKSGPGVYELGIGVSGSGLGREIYKLGPDSHSIVVVYLGQADNVRARLQRYGRSGAHLDDSSLQKGRPLFQEIFSHGFSIVYRWAPMQNKEDALRTEAQLLSTFDYAWNTSNNGIRRPDDILQKLLKIASGTRTFSDMARALLPFSFTQKQVGIRIKSSKLPLADDKLDAADNGSYNFLSRVFSFNRSRPRIVQEITGIIQDQESAKICGVALGDGSICRRPPADKRVRCPQHKGMRTNVSTAKARAPKSESTVANGYRYQNVSHDLEDPSQTEIESPADESITKANICGIILNDGSTCRRQPVKGRKRCPEHKGKRIRASIGVNQK*	382

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Apr6g1216	381	PANTHER	PROTEIN EFFECTOR OF TRANSCRIPTION 2-RELATED	3	375	IPR038909	GO:0003677\|GO:0006355
	Apr6g1216	381	SMART	uri_9	71	168	IPR000305	-
	Apr6g1216	381	Pfam	GIY-YIG domain-containing protein	23	176	-	-
	Apr6g1216	381	PANTHER	PROTEIN EFFECTOR OF TRANSCRIPTION 2-RELATED	3	375	-	-

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Apr6g1216	3	376	HRT Transcription Factor Family	AT5G56780	43.590	1.28e-91	281

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	TF	HRT	Apr6g1216		None	None	None

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Apr6g1216	-		-	gmx:100784450	506.138