Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr6g1206 ATGGAAAACATCAAAGATCCATCAATTTACCGCAATCCAATCATTTTGCAGAGTGAGGATTTAGGCAAGTATATACTAGAGACTGCTGTTTACCCTAGAGAACCTGAGCCTCTGAAAGAGCTGAGAGAAGCCACAAATACTCACCCTTGGAGCTTCATTGCTACCTTACCTGAAGCGGGTCAGCTATTGACCATACTATTGAAGCTGTTGAATCCCAAAAAGACCATTGAAGTGGGAGTGTTTACTGGTTATTCACTTCTCCTCACTGCACTCAACATCCCTGATGATGGAAAGATTACAGCCATAGATATTGATAGGAAAGCTTATGAAGTTGGGTTACCAGTGATAAAAAAGGCTGGGGTAGAGCACAAGATTAATTTCATAGAGTCTCCTGCTCTACCAATTTTGGATAAACTACTTGAAGATCCTGCAAATGAAGGGTCTTTTGACTTTGCCTTTGTTGATGCTGACAAAGAGAACTATGTGAACTACCATGAGAGGATAATAAAACTGGTCAAGGTTGGAGGGTTGCTTGTATATGACAACACACTGTGGGGTGGACGTGTTGCATGGCCTGAAGAGCAGGTTCCACCTCAGAGGAGATCAGGAAGGCAAGCAGCAATTGAATTCAACAAAATGATCACAAACGATTCTCGTGTTGAATTTTCTCTTACTTCTGTAGGGGATGGCCTCAATATTTGCAGGCGCATTGCTTGA 717 0.4226 MENIKDPSIYRNPIILQSEDLGKYILETAVYPREPEPLKELREATNTHPWSFIATLPEAGQLLTILLKLLNPKKTIEVGVFTGYSLLLTALNIPDDGKITAIDIDRKAYEVGLPVIKKAGVEHKINFIESPALPILDKLLEDPANEGSFDFAFVDADKENYVNYHERIIKLVKVGGLLVYDNTLWGGRVAWPEEQVPPQRRSGRQAAIEFNKMITNDSRVEFSLTSVGDGLNICRRIA* 239
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr6g1206 238 CDD AdoMet_MTases 76 180 - -
Apr6g1206 238 Gene3D Vaccinia Virus protein VP39 8 238 IPR029063 -
Apr6g1206 238 Pfam O-methyltransferase 28 237 IPR002935 GO:0008171
Apr6g1206 238 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 18 236 IPR029063 -
Apr6g1206 238 PANTHER METHYLTRANSFERASES SUPERFAMILY PROTEIN, PUTATIVE ISOFORM 1-RELATED 6 237 - -
Apr6g1206 238 ProSiteProfiles SAM-dependent O-methyltransferase class I-type profile. 14 237 IPR002935 GO:0008171
Apr6g1206 238 PANTHER O-METHYLTRANSFERASE-RELATED 6 237 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr6g1206 Apr-Chr6 16651606 16653216 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr6g1206 15 237 Monolignol Biosynthesis Gene Families AT4G26220 63.677 2.61e-105 302
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr6g1206 K00588 - gmx:100800911 431.409