Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr6g1200 ATGGCAAATTCTTGTGTATGCATCCCGTTGTTCACACTTTGTGTTGTTGGCCTTACAGTTTTTGTTCATGCACAGCAACAAACAGGCTTCATAAGCATAGATTGCGGTGGTCCAGAGAATTTTCAGTACACAGATGATGCCACTAAAATAAGGTACAGCACAGATGGAGTCTACATACAAACGGGGGTTAATAAGAACATCTCTTCTGACTATGGATACCCAAATAATCCCATTCTGCCAGAACCACTCTCAGATCTCAGAAGCTTTCCTCAGGGAAAGAGGAACTGTTACAGCTTAACAGCAGGAAGAAAAGGAAGTTTACATTTGATTAGGGCTTCCTTCTTGTATGGCAACTATGATGGAGAAAACAAGTTACCAGAGTTTGATCTCTATGTTGGTGTCAATTTCTGGTCATCAGTGAAATTTAGAAATGCTTCGGAGGAAGTTACAATGGAAATAATCAGTATAGCACAATCAGGGGTGACAAATGTTTGTCTTGTGAACAAGGGAGCAGGAACTCCTTTTATCTCAGGATTGGAACTGAGACCACTTAATAGTTCTATTTATAGTTCTGAGTTTAAGGAATCTGCTTCACTGTCACTTTTCAAAAGATGGGACATTGGATCACTAAATGGAAGTGGAAGATATGAAGATGATATTTATGATAGAATTTGGTCCCCCTTTAGTTCCTTATCTTGGGATTATGTCAACACTTCTTCACCAATAAATGTCAATGGCGATGGCTATAGAGCACCATTTGAAGTCATCAGCACTGCTGCTAGACCAAGGAATGACAATGATGCTTTGGAATTTTCCTGGACCCCAGATGATCCAAATTTGAAATTTTATGTCTACTTGTACTTTGCTGAAGTGGAGAAGCTTAAGAAAACACAACTAAGGAAATTCAATATATCATGGAATGGATCTCCATTGTTTGAATCCATAGTACCAAGCTACTTGTATGCAACCACTCTATCTAATTCAAAATCCTTGGTGGCAAATGAACATCGAATTTCTATACACAAAACAAAAGATTCAACCCTTCCACCCATTCTTAATGCAGTTGAGGTTTATGTAGTAAGACAGCTAGATGCACTTGAAACATTTGAACAAGATGTTAATGCAATGACGACCATAAAGGAGAGCTATAAAATTCAAAGAAATTGGGTGGGTGATCCATGTGAGCCAAAGAACTACTCTTGGGAGGGTTTAAATTGCAACTATAGCATTCAGCTTCCTCCTCGAATCATTTCTCTGAATATGAGCTCAAGCAGTTTGATTGGGACAATAACCTCTGCTATTTCCAATCTCTCCTCGTTGGAATCCTTGGACTTGCATAACAATAGCTTAACTGGATCAGTGCCCGAGTTTTTAGAAGAATTGAGATCCCTTAAATACTTGAATTTGAAGGGGAACCTACTTTCAGGTACCCTCCCTACCACTCTTGTAGAAAGATCAAGGGCTGGATTACTTACATTGAGCGTGGATGATCAAAATCTCTCTGACTCAGAAGAGAACAAAAAGAGCAAGAAGAAAATTGTTGTTCCAATAGTTGCATCAGTATCATCAGTTTTAGTTCTATTGATTGTTTTCGTTCTCATTAGGAAACTTAGAAGAAATGAACAATCAGATGAGGAGATGAATATGCTCAATAAAGGAGGAAGAACTGTAACAACTAAGAACTGGCAATATACATATTCAGAGATCTTAGACATCACCAACAACTTTGAAATGGTCATTGGGAAGGGAGGATTTGGAACTGTGTACGCTGGTGAGATGAAAGATGGCAAACAAGTTGCAGTGAAGATGCTTTCTCCATCATCATCTCAGGGGCCAAAGGAATTTCAAACTGAGGCTGAGCTCTTGATGACTGTTCATCACAAAAATTTGGTATCCTTCATTGGTTATTGTGATGATGATAACAAGATGGCACTCATATACGAGTACATGGTCAATGGAAACCTAAAAGATTATCTCTTACTCTCAGATAAAGATACACCTTGCTTGAGTTGGGAAAGGAGACTTCAGATAGCAATTGATGCCGCAGAAGGGTTGGATTACCTACATCACGGATGCAAGCCACCTATAGTTCACAGGGATGTGAAATCAGCCAACATTCTTTTAAGTCAAGAATTAGAAGCTAAGATAGCAGATTTTGGCCTCTCCAAGGAGTTTAGAAAAGATAACCAAAATGCAGAGTCTGCAGTGATTCATAATGATGCCGGAAACCCAGATACTGCAGTCGTGGGCACCACAGGGTACCTTGACCCAGAGTACTACAAATTAAGGACCATGAATGAGAAAAGTGACATTTATAGCTTTGGAATCGTTCTACTGGAATTAATCACGGGTCGTCCTGCAATAATGAAAGGCAACCCATTAATGCATATACTTGAGTGGATAAGACCTGAGCTTGAAACAGGAGATTTGAGTAGAATTTTAGATCCAAGGCTCCAAGGAAAATATGATGCAAGTTCTGGGTGGAAGGCTTTAGGAATAGCAATGACATGCACTGCTTCAACTTCCATTCAGAGACCTAAAATGTATCTTGTGTTAGCAGAGCTAAAACATTGTTTAAACATGGAGTTGCCTAGTGATAGTGAAACATTTGTGGCCCCTAAGCAATTCTATGGCGAATTTTACAGTTCATCTGAAGCATATTCCTTAGATAGTGGATCCACCACCTATCCTTTCCCAAGATAG 2703 0.3929 MANSCVCIPLFTLCVVGLTVFVHAQQQTGFISIDCGGPENFQYTDDATKIRYSTDGVYIQTGVNKNISSDYGYPNNPILPEPLSDLRSFPQGKRNCYSLTAGRKGSLHLIRASFLYGNYDGENKLPEFDLYVGVNFWSSVKFRNASEEVTMEIISIAQSGVTNVCLVNKGAGTPFISGLELRPLNSSIYSSEFKESASLSLFKRWDIGSLNGSGRYEDDIYDRIWSPFSSLSWDYVNTSSPINVNGDGYRAPFEVISTAARPRNDNDALEFSWTPDDPNLKFYVYLYFAEVEKLKKTQLRKFNISWNGSPLFESIVPSYLYATTLSNSKSLVANEHRISIHKTKDSTLPPILNAVEVYVVRQLDALETFEQDVNAMTTIKESYKIQRNWVGDPCEPKNYSWEGLNCNYSIQLPPRIISLNMSSSSLIGTITSAISNLSSLESLDLHNNSLTGSVPEFLEELRSLKYLNLKGNLLSGTLPTTLVERSRAGLLTLSVDDQNLSDSEENKKSKKKIVVPIVASVSSVLVLLIVFVLIRKLRRNEQSDEEMNMLNKGGRTVTTKNWQYTYSEILDITNNFEMVIGKGGFGTVYAGEMKDGKQVAVKMLSPSSSQGPKEFQTEAELLMTVHHKNLVSFIGYCDDDNKMALIYEYMVNGNLKDYLLLSDKDTPCLSWERRLQIAIDAAEGLDYLHHGCKPPIVHRDVKSANILLSQELEAKIADFGLSKEFRKDNQNAESAVIHNDAGNPDTAVVGTTGYLDPEYYKLRTMNEKSDIYSFGIVLLELITGRPAIMKGNPLMHILEWIRPELETGDLSRILDPRLQGKYDASSGWKALGIAMTCTASTSIQRPKMYLVLAELKHCLNMELPSDSETFVAPKQFYGEFYSSSEAYSLDSGSTTYPFPR* 901
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr6g1200 900 ProSiteProfiles Protein kinase domain profile. 574 860 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr6g1200 900 CDD STKc_IRAK 580 856 - -
Apr6g1200 900 Pfam Protein tyrosine and serine/threonine kinase 577 787 IPR001245 GO:0004672|GO:0006468
Apr6g1200 900 ProSitePatterns Serine/Threonine protein kinases active-site signature. 696 708 IPR008271 GO:0004672|GO:0006468
Apr6g1200 900 ProSitePatterns Protein kinases ATP-binding region signature. 580 602 IPR017441 GO:0005524
Apr6g1200 900 Gene3D Transferase(Phosphotransferase) domain 1 650 872 - -
Apr6g1200 900 Pfam Malectin-like domain 33 359 IPR024788 -
Apr6g1200 900 Pfam Leucine rich repeat 418 474 IPR001611 GO:0005515
Apr6g1200 900 SUPERFAMILY L domain-like 374 502 - -
Apr6g1200 900 Gene3D Ribonuclease Inhibitor 362 489 IPR032675 -
Apr6g1200 900 SUPERFAMILY Protein kinase-like (PK-like) 559 855 IPR011009 -
Apr6g1200 900 PANTHER OS07G0107800 PROTEIN-RELATED 10 878 - -
Apr6g1200 900 PANTHER BNAC07G41790D PROTEIN 10 878 - -
Apr6g1200 900 Gene3D Phosphorylase Kinase; domain 1 545 649 - -
Apr6g1200 900 SMART serkin_6 574 829 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr6g1200 Apr-Chr6 16622276 16627450 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr6g1200 1 886 Receptor kinase-like Gene Family AT4G29180 51.441 0.0 894
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-I-1 Apr6g1200 Malectin_like 8.6e-108 CL0202
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr6g1200 - - gmx:100793137 1419.45