Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr6g1185 ATGGGGAACAAACTCGCGCGCACGACGCAAGTTTCAGCTTCCGAATACTATCTACACGACTTGCCGTCTACCTATAATCTCGTTCTCAAGGAGGTTCTCGGTCGCGGTCGTTTCTTCAAATCGATTCAGTGCAAGCACGACGAGGGTTTGGTCCTCGTTAAGGTCTATTTCAAGCGTGGCGATTTCCTCGATCTCTCTGATTACGAACGCCGTCTCTCTCAGATCAAAGACATATTCAGCGCCATCGATGATCCTCACGTTTGGCCTTTTCAGTTTTGGCAAGAAACTGATAAGGCGGCTTATCTTTTGAGGCAATATTTCTTCCATAATCTGCATGATCGATTAAGCACGCGTCCTTTTCTTAGTATCGTTGAGAAGAAATGGTTGGCTTTTCAGTTGCTTTTAGCTGTAAAACAGTGTCATGAGAAGGGAGTGTGCCATGGTGATATTAAGTGTGAGAATGTGCTGGTTACGTCATCAAATTGGCTTTATCTTGCTGACTTTGCGTCTTTCAAACCAACTTACATTCCGTATGATGACCCATCGGATTTTTCGTTTTTCTTTGACACTGGTGGGAGAAGGCTATGTTATCTTGCACCTGAGAGATTTTATGAACATGGAGGGGAGATGCAGATGGGACAAGATACCCCCTTAAAGCCATACATGGATATATTTGCCGTTGGGTGTGTAATTGCTGAACTTTTTCTTGAGGGGCAGCCACTATTTGAACTGTCTCAACTACTTGCTTATCGCAGAGGGCAATATGATCCAAGTCAACATCTTGAAAAAATACCAGATCTTGGAATCCGTAAGATGATACTGCACATGATTCAGTTAGAACCAGAGTCTAGATTTTCTGCTGAAAAATATCTGAAGGAATATGCTGCAGTTGTATTTCCAACCTATTTTTCACCATTTCTGCATGATTTTTACCGATGCTGGAGTCCTCTCCATTCTGATACAAGGGTTCTACTATGCCAAAGTGCTTTTCCAGAGATACTTAAACAAATGATGAACAAGAAATCATCTGGTGACACAGGTGTTAATTCTGGGGAAATTTTGGAAGAGATGGTTGCAAAAGAAAGTATGAGTTTCATGAAGGACTCACTGATGAAGACAGAGGACATAGGCAAAGGCTTAGTCCATGATCACTATGAACTTCTTGGTGGTATTAGTAGCCTACTGACGGATGCTAAAAGAAATAATAATTCATCATATGTAACAGGAAATGCACACAATTCAACCTTTCCTGAAAATCTAAAAAATTTGCAGTCTACTGGTAAGCTGCTTCAAACTATCTCCAATGCATTTCGAGGAAATGACCATCCCTTTCTGAAAAGTGTTACCATGAATGATTTAAATTCATTGATGTCTGAGTATGATAGTCAATCAGATACATTTGGAATGCCTTTTCTACCATTACCCAAGGATAGTATGAGATGTGAAGGCATGGTTTTGATTACTTCTTTGCTGTGCTCCTGCATACGCAATGTCAAGTTGCCTCACCTGAGGAGAGCAGCTGTACTCTTGTTGAAGGCTTCTGCCCTATATGTTGATGATGAAGATCGTTTGCAGCGTGTTATCCCATTTGTGATTGCAATGCTTTTGGATCCAGCAGCAATTGTGCGTTGTGCGGCTTTGGAGACTTTGTGTGACATTCTTCCCTTAGTGCGAGATTTTCCTCCTAGTGATGCAAAGATATTTCCTGAGTATATTCTTCCAATGCTTTCTATGCTTCCTGATGATCCAGAGGAAAGTGTGAGGATATGCTATGCCAGCAATATAGCTAAGCTGGCGCTGACTGCTTATGGATTCTTGATACACTCAATAAGCTTGAGTGAGGCAGGTGTCCTTGATGAATTGAGTTCACCACAGAAGCCATTGACATCATCCACTCAGACCTCTTCTGGAAGAATGAAGAGGATAAATAGTGATGTCCAACTTCTGCAGCTGAGGAAGTCTATTGCAGAGGTTGTCCAAGAACTTGTTATGGGGCCAAAGCAAACACCAAACATAAGGAGAGCACTTCTTCAGGATATTGGTAAACTATGCTACTTCTTTGGTGTGAGACAGAGTAATGACTCTCTCTTACCCATCCTCCCCGCTTTCTTAAATGATCGGGATGAGCAATTAAGGACAGTATTCTACGAAAAGATTGTTTATGTCTGCTTTTTTGTGGGCCAAAGAAGTGTAGAAGAATATTTATTGCCTTACATTGAGCAAGCTTTAAGTGACACAACAGAAGCTGTCATTGTTAAAGCATTAGAATGTTTGACTATTCTATGCAAAAGTGGGTTCTTCCGGAAGAGAATATTACTTCAAATGATAGAGCGAGCCTTTCCTTTATTGTGTTATCCTAGTGAATGGGTACGAAGATCAGTTGTCTGTTTCATTGCTGATAGCAGTAAGAGCTTGGGTGCTGTTGATTCTTATGTTTTCCTTGCTCCTGTTATACAGCCTTTCCTTCGCAGGCAACCTGTGTCTCTTGCTTCAGAGAAGGCTCTTTTGTCATGTTTAAAACCTCCAGTCTCAAGACCGGTTTTCTATGAAGTCTTGGAAAACTCGAGGAGTTCGGACATGTTAGAAAGACAGAGAAAAATATGGTATAGTTCATCACAATCTAAACTATGGGAGATGGATTTACTGAAAAAAGGAATTGATGAGTTGGACTCATTAAAAAACTGGACTGACAAGCAGCAAGACCCTGAGGTTCAACAAACTGTTGGCACTGCCCTCCAACAGCCAGGGCTAATTGATTGTGACAAAGCTGAGGCAAAATTGAGAGATATGGGGGCGTTCATGCATAACGATAGCAATATGGTGGGACATCGTGATACTCAATGCTTGGAGAAGTTACAGTTTTCAGGATTTATGTCACCACATTTTAGTGGTGTGAACAGTTTGACATACGAAAAGCCATCGGAAGGCATACCTTTGTACTCCTTCAGTGTGGACAGGCGGGGAACGGGAATCCCTCCTGCTGCATCTGATCCTCCACTACAAATGAATTCTCTAGGTGTTAGTTCATCTGCAATGCCTTGGGTTAATCCACTTAGTAAGTCCTTTAATTTGGCTAATTCGGTTCCGGCACCAAAGCTTTTCTCAGGTTCTTTTAGCATCAGCAATGGTTCTAAACAGTTCCATCGAGTGGTACATGAACCAGATGCCAGGGAAAATGAGACAGCCTATGTTAATAGCTCATTTCAAGATGCTGGATTATCTACTAATATTAAAGGTACTTCAATTGCTCTGGAAGATGCAACTGCCCAAACTGATCTGTCAGGATTTCCTTCTTTTGCTCGAGCATCCATGCCTGATTCTGGTTGGAGGCCTCGTGGGGTGTTGGTTGCACACCTCCAGGAGCACCGTTCAGCTGTCAATGACATAGCTATTTCTGCTGATCATAGCTTCTTTGTGAGTGCATCTGATGACTCTACAGTCAAGATTTGGGATTCCAGAAAGCTGGAAAAGGACATTTCATTTAGGTCAAAGCTAACTTATCACCTGGAGGGAAGCCGTGCATTGTGTGCATCAATGCTTCCAGGTTCTGCACAAGTTATAGTTGGAGCATCTGATGGGTTTATTCACATGTTTTCTGTTGATCATATCTCTAGAGGTCTAGGAAATGTTGTTGAGAAATACTCTGGTATTGCTGATATCACAAAGAAGGATGTCAAGGAAGGTGCCATACTCAACCTTTTGAATTGCCCTGTGGATAATTATACAATTATGTATAGCACCCAGAACTGTGGCATTCATCTGTGGGATACTAGGTCAAATTCCAATACTTGGACTCTAAAAGCTACACCTGAGGAGGGCTATGCATCTTCTCTGGCATCAGGGCCCTGTGGTAATTGGTTTGTATCGGGGTCATCCCGGGGTGTTATTACACTTTGGGATCTTAGGTTTCTTGTACCTGTGAATTCTTGGCAGTATTCTCTTGCTTGCCCAATAGAAAAGATGTGTCTCTTTCTTCCTCCTCCAAATGCTTCTTTGTCTTCAACTGCTAGGCCCCTTGTTTATGTGGCTGCTGGTTGCAATGAAGTTTCTCTCTGGAATGCAGAGAATGCTAACTGCCACCAGGTCCTACGGATGGCCAATTATGACAGTGATGCAGAGATGTCTGATCTGCCTTGGGCCTTGGCTAAACCTTCAAGTAAGCCAACTTCTCAGTCAGATCTAAGACGAAATGTTAATTGCAAGTATGGAGTTGATGAGCTAAATGAACCTCCTCCTCGTCTTCCGGGTATTCGTTCTCTACTTCCCTTGCCAGGGGGTGATTTATTGACTGGGGGCACTGATTTGAAGATACGTCGGTGGGATCATTACAGACCTGACAGAAGTTACTGTATCTGTGGACCAAGCTTAAAAGGAGTAGGAAATGATGATTTTTATGAAACAAAATCTAGTTTTGGGGTGCAAGTTGTACAGGAGACAAAAAGACGTCCTCTCCCCACTAAGCTGACAGTAAAGGCAATTCTTTCAGCCGCTGCCACTGATTCTGCTGGTTGCCATCGTGACTCTATTGTATCTTTGGCTTCTATCAAGTTAAACCAGAGACTCTTACTTTCAAGTGGAAGAGATGGGGGCATCAAGGTTTGGAAGTAA 4608 0.4238 MGNKLARTTQVSASEYYLHDLPSTYNLVLKEVLGRGRFFKSIQCKHDEGLVLVKVYFKRGDFLDLSDYERRLSQIKDIFSAIDDPHVWPFQFWQETDKAAYLLRQYFFHNLHDRLSTRPFLSIVEKKWLAFQLLLAVKQCHEKGVCHGDIKCENVLVTSSNWLYLADFASFKPTYIPYDDPSDFSFFFDTGGRRLCYLAPERFYEHGGEMQMGQDTPLKPYMDIFAVGCVIAELFLEGQPLFELSQLLAYRRGQYDPSQHLEKIPDLGIRKMILHMIQLEPESRFSAEKYLKEYAAVVFPTYFSPFLHDFYRCWSPLHSDTRVLLCQSAFPEILKQMMNKKSSGDTGVNSGEILEEMVAKESMSFMKDSLMKTEDIGKGLVHDHYELLGGISSLLTDAKRNNNSSYVTGNAHNSTFPENLKNLQSTGKLLQTISNAFRGNDHPFLKSVTMNDLNSLMSEYDSQSDTFGMPFLPLPKDSMRCEGMVLITSLLCSCIRNVKLPHLRRAAVLLLKASALYVDDEDRLQRVIPFVIAMLLDPAAIVRCAALETLCDILPLVRDFPPSDAKIFPEYILPMLSMLPDDPEESVRICYASNIAKLALTAYGFLIHSISLSEAGVLDELSSPQKPLTSSTQTSSGRMKRINSDVQLLQLRKSIAEVVQELVMGPKQTPNIRRALLQDIGKLCYFFGVRQSNDSLLPILPAFLNDRDEQLRTVFYEKIVYVCFFVGQRSVEEYLLPYIEQALSDTTEAVIVKALECLTILCKSGFFRKRILLQMIERAFPLLCYPSEWVRRSVVCFIADSSKSLGAVDSYVFLAPVIQPFLRRQPVSLASEKALLSCLKPPVSRPVFYEVLENSRSSDMLERQRKIWYSSSQSKLWEMDLLKKGIDELDSLKNWTDKQQDPEVQQTVGTALQQPGLIDCDKAEAKLRDMGAFMHNDSNMVGHRDTQCLEKLQFSGFMSPHFSGVNSLTYEKPSEGIPLYSFSVDRRGTGIPPAASDPPLQMNSLGVSSSAMPWVNPLSKSFNLANSVPAPKLFSGSFSISNGSKQFHRVVHEPDARENETAYVNSSFQDAGLSTNIKGTSIALEDATAQTDLSGFPSFARASMPDSGWRPRGVLVAHLQEHRSAVNDIAISADHSFFVSASDDSTVKIWDSRKLEKDISFRSKLTYHLEGSRALCASMLPGSAQVIVGASDGFIHMFSVDHISRGLGNVVEKYSGIADITKKDVKEGAILNLLNCPVDNYTIMYSTQNCGIHLWDTRSNSNTWTLKATPEEGYASSLASGPCGNWFVSGSSRGVITLWDLRFLVPVNSWQYSLACPIEKMCLFLPPPNASLSSTARPLVYVAAGCNEVSLWNAENANCHQVLRMANYDSDAEMSDLPWALAKPSSKPTSQSDLRRNVNCKYGVDELNEPPPRLPGIRSLLPLPGGDLLTGGTDLKIRRWDHYRPDRSYCICGPSLKGVGNDDFYETKSSFGVQVVQETKRRPLPTKLTVKAILSAAATDSAGCHRDSIVSLASIKLNQRLLLSSGRDGGIKVWK* 1536
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr6g1185 1535 Pfam Protein kinase domain 29 292 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr6g1185 1535 SMART serkin_6 27 303 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr6g1185 1535 SUPERFAMILY Protein kinase-like (PK-like) 26 314 IPR011009 -
Apr6g1185 1535 SMART WD40_4 1407 1441 IPR001680 GO:0005515
Apr6g1185 1535 SMART WD40_4 1112 1151 IPR001680 GO:0005515
Apr6g1185 1535 SMART WD40_4 1495 1535 IPR001680 GO:0005515
Apr6g1185 1535 SMART WD40_4 1259 1300 IPR001680 GO:0005515
Apr6g1185 1535 SMART WD40_4 1162 1199 IPR001680 GO:0005515
Apr6g1185 1535 CDD STKc_Vps15 16 303 - -
Apr6g1185 1535 ProSitePatterns Serine/Threonine protein kinases active-site signature. 145 157 IPR008271 GO:0004672|GO:0006468
Apr6g1185 1535 ProSiteProfiles HEAT repeat profile. 696 734 IPR021133 -
Apr6g1185 1535 ProSiteProfiles Trp-Asp (WD) repeats profile. 1518 1535 IPR001680 GO:0005515
Apr6g1185 1535 Pfam WD domain, G-beta repeat 1115 1151 IPR001680 GO:0005515
Apr6g1185 1535 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 1119 1151 - -
Apr6g1185 1535 Gene3D - 1222 1535 IPR015943 GO:0005515
Apr6g1185 1535 Gene3D - 615 840 IPR011989 -
Apr6g1185 1535 Pfam HEAT repeat 527 555 IPR000357 GO:0005515
Apr6g1185 1535 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 1502 1535 - -
Apr6g1185 1535 Gene3D Transferase(Phosphotransferase) domain 1 22 302 - -
Apr6g1185 1535 SUPERFAMILY WD40 repeat-like 1113 1535 IPR036322 GO:0005515
Apr6g1185 1535 PANTHER PHOSPHOINOSITIDE 3-KINASE REGULATORY SUBUNIT 4 1 1535 IPR045162 GO:0004674|GO:0016236|GO:0045324
Apr6g1185 1535 Gene3D - 474 614 IPR011989 -
Apr6g1185 1535 Gene3D - 1048 1219 IPR015943 GO:0005515
Apr6g1185 1535 ProSiteProfiles Protein kinase domain profile. 27 307 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr6g1185 1535 ProSiteProfiles Trp-Asp (WD) repeats profile. 1119 1151 IPR001680 GO:0005515
Apr6g1185 1535 SUPERFAMILY ARM repeat 421 822 IPR016024 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr6g1185 Apr-Chr6 16491505 16499883 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr6g1185 17 242 MAP Kinase Gene Family AT2G42880 25.000 1.31e-09 60.5
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_Pl-Tthe Apr6g1185 Pkinase 3.4e-20 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr6g1185 K08333 - gmx:100818467 2870.49