Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr6g1177 ATGAAAATATTAGCCACATCCCATGTTAAAATGTTATTTTACTATTTTCTAACCATTTTCTTAATCTTGAGCCATGCGCACTCTGAGACTCTGTTGCATGATCAAGAACATGCAATCCTAATGAAGATAAAGTTGCACCTACAAAACCCACTATTCTTGAGTCATTGGACTTCATCAGACACTTCTCATTGCTCTTGGTCAGAAATCACATGCACCAATGACTCTATCACTGGATTGACTTTGGTCAACAGCACCATCACTCAAACAATGCCATCTTTTCTATGTGACCTCAAAAATCTCACACAAGTTGATTTCAGAAACAATTCCATTCCAGGGGAGTTCCCAACATTTCTCTACAAATGTTCCAAGTTGGTGTACCTTGACCTCTCAATGAACAACTTTGGTGGTAACATACCTCATGACATAGACAAATTGGTTAACTTGCAGTACCTTAATCTTGGTTCCACCAACTTGTATGGTGACATTCCTGCAAGCATTGGAGGGTTAAAGGAGCTGAGATTGCTTCAACTTCAGTATTGTCTATTCAATGGTACTTTTCCTGCTGAGAACATTAGCAACTTGGTCAATCTTGAATTCTTGGACATGTCTTCTAACTTAGTGCTCCCTCCTTCTAAGTTCCCTTCAAGTTTGACCAAGTTGAAAAAATTGAAGTTCTTTCACATGTATAGTTCTAACTTCTTTGGGAACATCCCTGAAACCATTGGAGAAATGGTGGCTTTGGAGAGCTTGGATTTATCACGAAGCAACTTAACTGGACACATTCCCAAAGGTTTGTTCTTGTTGAAGAATTTGAGCCAAGTGTATCTTTTCAGGAACAAACTTTCTGGTGAGATACCTGATGTGGTTGAAGCCCTGAATTTGATTGAACTTGATCTAGCAGAAAACAATCTTACTGGGAAAATACCTGAAGATTTTGGGAAGCTCCAAAAGTTAACATGGTTGAGTTTGTCTCTCAATAACTTGTCAGGGGAGATACCACAAAGCTTAGGCCATCTTCCATCTTTGGCACATTTTCATGTCATTTTCAACAACTTGTCAGGTACTATTCCTCCTGAATTTGGTCGCTACTCAAAGCTTGAAACATTTATGGTTTCATCTAATAGTTTTAGTGGAAAGTTACCGGAGAACTTATGCTACCATGGTCAGTTACTTAATTTATCTACTTATAATAATCATCTGAGTGGAGAGTTGCCAGAATCACTTGGGAATTGTAGTAGCCTGATAGATTTGAAAATTTTTAGTAACGAGTTTTCGGGTAGTATTCCTAGTGGTCTTTGGACTTTCAAGATGTCAAATTTCATGGTAAGAGATAATAAGTTCACTGGTGAGCTTCCTGAGAGATTGTCCTCAAGTATTTCACGCTTTGAGATAAGTTACAATCAGTTTTATGGCAGGATTCCAAGAGGGGTATCTTCATGGACTAATGTGGTAGTGTTTAATGCTAGTAAGAACTACTTCAATGGAAGTATTCCAAAAGAGTTAACAGCTCTTCCCAAGCTAACAACTCTATTGCTTGATCAGAACCAGCTCACAGGGCCACTTCCATCAGATATAATATCATGGAAGTCCCTGGAAAATCTAAATCTGAGTCATAACCAAATCTCTGGACAAATCCCAGATTCAATTGCTCTATTACCTGTCCTTAGCCAACTTGACTTGTCAAAAAATCAATTCTCTGGCCAGGTTCCTTCTATACTTCCTAGACTCACCAATCTAAATTTATCCTCTAACCATTTGTCAGGGAAAATTCCAAGTGAATTTGAGAATCCTGTGTTTTCCACCAGCTTTTTGGATAATTCTGGCCTCTGTGCTGATACCTCAGCATTCAACATTACGTTGTGCAATGTTGGCTTTGAAAGGCCAACCAAAGGTTCATCTTGGTCTCTTGCTTTGATTATAAGCCTGGTGGTAGTAACCTTCTTACTAGCCTTATTGATATCACTCTTGATTATCAAACTTTACAGAAAAGGGAAGACAAGATTGGATAACTCATGGAAGCTTATTTCATTTCAAAGGGTGAGTTTCAATGAATCAAACATAGTATCATCAATGACAGAAAATAATGTTATTGGCAGTGGTGGATTTGGTACAGTATATCGTGTTACCGTTGATGGTTTAGGCTATGTTGCTGTGAAAAAGATCTCCAATAACAGAAAGTTAGACCAAAAGCTAGAGAGCTCATTTCGTGCAGAAGTGAAAATATTGAGCAACATTCGGCATAAGAACATTGTGAAATTGATATGCTGTATATTTAATGAGGATTCTATGCTTCTTGTCTATGAGTATTTGGAAAACTGTAGCCTGGATAGGTGGTTGCACAAAAAGGGGAAGCCATCATCTGTGTCAGGTTCAGTCCATCATTTTGTGCTTGAGTGGCCAAAGAGATTGCAAATAGCCATTGGGATAGCCCAAGGTTTGTGCTACATGCACTACGATTGCTCACCACCAATTGTTCATCGAGATATAAAAACAAGCAACATCCTTTTGGATTCTCAATTTAATGCAAAAGTTGCTGATTTTGGTCTGGCTAGGATGTTAATCAAGCCAGGGGAACTTGCCACCATGTCATCTGTGATTGGCTCATTTGGCTACATGGCTCCAGAATATGTTCAAACAAAGAGAGTAAGTGAAAAGATTGATGTCTTTAGCTTTGGCGTTGTACTATTGGAATTGACAACTGGCAAAGAGGCTAATTATGGTGATGAGCACTCATCTCTTGCAGAGTGGGCGTGGCGTCACCACCAGTTAGGAAGCAATATAAAAGAGCTACTAGACAATGATTTCGTAGAACCTATGTACATAAATGAAATGTGCAGCATTTTCAAACTTGGGCTCATTTGTACTTCAACTCTTGCTGCTAATAGGCCTTCCATGAAGGAGGTCTTACACATATTGCTCAACTGTGGAGAAGGATTTGTGTTTGGAAAGGAAAATGTTAGGGAATATGATGGTATCCCCCTTCTTAAGAATTCAAAATGGGAGAGAAAGTTGCATGTTGTTGATAATGATAGTGACTAA 3039 0.387 MKILATSHVKMLFYYFLTIFLILSHAHSETLLHDQEHAILMKIKLHLQNPLFLSHWTSSDTSHCSWSEITCTNDSITGLTLVNSTITQTMPSFLCDLKNLTQVDFRNNSIPGEFPTFLYKCSKLVYLDLSMNNFGGNIPHDIDKLVNLQYLNLGSTNLYGDIPASIGGLKELRLLQLQYCLFNGTFPAENISNLVNLEFLDMSSNLVLPPSKFPSSLTKLKKLKFFHMYSSNFFGNIPETIGEMVALESLDLSRSNLTGHIPKGLFLLKNLSQVYLFRNKLSGEIPDVVEALNLIELDLAENNLTGKIPEDFGKLQKLTWLSLSLNNLSGEIPQSLGHLPSLAHFHVIFNNLSGTIPPEFGRYSKLETFMVSSNSFSGKLPENLCYHGQLLNLSTYNNHLSGELPESLGNCSSLIDLKIFSNEFSGSIPSGLWTFKMSNFMVRDNKFTGELPERLSSSISRFEISYNQFYGRIPRGVSSWTNVVVFNASKNYFNGSIPKELTALPKLTTLLLDQNQLTGPLPSDIISWKSLENLNLSHNQISGQIPDSIALLPVLSQLDLSKNQFSGQVPSILPRLTNLNLSSNHLSGKIPSEFENPVFSTSFLDNSGLCADTSAFNITLCNVGFERPTKGSSWSLALIISLVVVTFLLALLISLLIIKLYRKGKTRLDNSWKLISFQRVSFNESNIVSSMTENNVIGSGGFGTVYRVTVDGLGYVAVKKISNNRKLDQKLESSFRAEVKILSNIRHKNIVKLICCIFNEDSMLLVYEYLENCSLDRWLHKKGKPSSVSGSVHHFVLEWPKRLQIAIGIAQGLCYMHYDCSPPIVHRDIKTSNILLDSQFNAKVADFGLARMLIKPGELATMSSVIGSFGYMAPEYVQTKRVSEKIDVFSFGVVLLELTTGKEANYGDEHSSLAEWAWRHHQLGSNIKELLDNDFVEPMYINEMCSIFKLGLICTSTLAANRPSMKEVLHILLNCGEGFVFGKENVREYDGIPLLKNSKWERKLHVVDNDSD* 1013
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr6g1177 1012 SUPERFAMILY Protein kinase-like (PK-like) 686 972 IPR011009 -
Apr6g1177 1012 Pfam Leucine Rich Repeat 575 596 IPR001611 GO:0005515
Apr6g1177 1012 PANTHER RECEPTOR KINASE-LIKE PROTEIN XA21 14 1003 - -
Apr6g1177 1012 SUPERFAMILY L domain-like 34 291 - -
Apr6g1177 1012 ProSiteProfiles Leucine-rich repeat profile. 530 552 IPR001611 GO:0005515
Apr6g1177 1012 Gene3D Ribonuclease Inhibitor 291 382 IPR032675 -
Apr6g1177 1012 Gene3D Ribonuclease Inhibitor 383 477 IPR032675 -
Apr6g1177 1012 Gene3D Phosphorylase Kinase; domain 1 669 769 - -
Apr6g1177 1012 Gene3D Ribonuclease Inhibitor 190 290 IPR032675 -
Apr6g1177 1012 Gene3D Ribonuclease Inhibitor 478 618 IPR032675 -
Apr6g1177 1012 Gene3D Ribonuclease Inhibitor 33 189 IPR032675 -
Apr6g1177 1012 Pfam Leucine rich repeat N-terminal domain 34 71 IPR013210 -
Apr6g1177 1012 PANTHER LRR RECEPTOR-LIKE KINASE FAMILY PROTEIN 14 1003 - -
Apr6g1177 1012 SMART LRR_typ_2 194 220 IPR003591 -
Apr6g1177 1012 SMART LRR_typ_2 315 339 IPR003591 -
Apr6g1177 1012 SMART LRR_typ_2 573 596 IPR003591 -
Apr6g1177 1012 SMART LRR_typ_2 504 528 IPR003591 -
Apr6g1177 1012 SMART LRR_typ_2 145 169 IPR003591 -
Apr6g1177 1012 SMART LRR_typ_2 244 268 IPR003591 -
Apr6g1177 1012 ProSitePatterns Protein kinases ATP-binding region signature. 697 720 IPR017441 GO:0005524
Apr6g1177 1012 SMART serkin_6 691 973 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr6g1177 1012 ProSiteProfiles Protein kinase domain profile. 691 973 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr6g1177 1012 CDD STKc_IRAK 697 972 - -
Apr6g1177 1012 Pfam Leucine rich repeat 293 352 IPR001611 GO:0005515
Apr6g1177 1012 Pfam Protein kinase domain 693 970 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr6g1177 1012 ProSitePatterns Serine/Threonine protein kinases active-site signature. 824 836 IPR008271 GO:0004672|GO:0006468
Apr6g1177 1012 Gene3D Transferase(Phosphotransferase) domain 1 770 979 - -
Apr6g1177 1012 SUPERFAMILY RNI-like 228 600 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr6g1177 Apr-Chr6 16420057 16423725 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr6g1177 36 1010 Receptor kinase-like Gene Family AT5G25930 49.187 0.0 897
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Apr6g1177 Pkinase 2.4e-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr6g1177 - - gmx:100819744 1564.28