Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr6g1154 ATGGGTTGCATTTACTCGCGCGTTTGCATAGGCGACAATTGCAGAGGCTCAAGCATCAATGGAGACCCAATTGTGAGAACTGAAGTAGAAGGCGCGTTCTCAACAACCTCTTCAGATGTTCAAGAAGCTGAAATCAGAGACCAATTGAACCAATTAAGCATAACAAGAGACTCTGAAGCTGGAATCCGAAGACTCGCTAGGGTTTCTGCGCAGTTTCTTCCACCAGATGGTTCTAGAATCGTTAAGGTTCCTTCTGGAAACTTCGAATTGCGCTATTCCTTCTTGTCACAGCGAGGTTACTACCCCGATGCACTTGATAAAGCCAACCAAGACAGTTTCTGCATCCACACGCCGTTCGGTACGAGCCCTAACGATCACTTCTTCGGAGTCTTCGATGGACACGGCGAATTCGGAGCTCAATGTTCCCAATTCGTGAAGAGAAAACTGTGCGAGAATTTGCTGAGAAATTCAAAATTTCGTGTGGACCCGGTTGAGGCATGTCACGGGGCATTTTTGGCGACGAATTCGCAGCTTCATGCGGATGTTTTGGACGATAGCATGAGTGGGACGACGGCGATCACGGTGTTGGTTAGGGGGAAGACGATGTACGTGGCGAATTCCGGTGATTCGAGGGCGGTGGTTGCGGAGAGGAGAGGGAAGGATTTGGTGGCGGTGGATTTGTCGATTGATCAGACCCCTTTTAGGACTGATGAGCTTGAAAGGGTGAAGCTTTGTGGGGCTAGGGTTCTTACGTTGGATCAGATTGAAGGGATTAAGAATCCTGAGGTTCAGTGTTGGGGTAGTGAAGAGGAAGGGGATGATGGGGACCCTCCTAGGTTGTGGGTCCCTAATGGGATGTACCCTGGTACTGCTTTTACAAGGAGCATTGGTGATTCCATTGCTGAGACTATTGGGGTTGTTGCTAACCCTGAGATTGTTGTGTTTGAGCTTACCCAAGATCACCCTTTCTTTGTTCTTGCTAGTGATGGGGTGTTTGAGTTTCTCTCTAGCCAGAAAGTGGTTGAAATGGTTGCAAAATTCAAAGATCCCCGTGATGCTTGTGCTGCAATTGTGGCAGAATCTTATCGACTCTGGCTACAGTATGAAACTCGTACAGATGATATTACAGTCATCATTGTGCATCCTGCGGCTGGTCAGTCAGCAAGTTATGGTGATGTTTTACGAACCCCTGTGCCTCAAGTTGTAGAGGTGACAGGTTCAGAGTCCCCTTCCACTTTTGGCTGGAATGCTAGGAACCATCGTGTAAGACATGACTTGTCAAGGGCACGCCTCCGGGCAATTGAGAATACGTTAGAGAATGGACAAAGTTGGATTCCTCCATCTTCAGCCCACAGGAAGACATGGGAGGAAGAAGCACACATAGAACAAGCTTTGCATGACCATTTTCTCTTCCGAAAACTTACTGATTCTCAGTGTCATGTTTTATTGGATTGCATGCAAAGAGTTGAGGTCCAACCTGGGGATATTATAGTCAAACAGGGTGGTGAAAGTGACTGCTTTTATGTTGTTGGTAGTGGAGAATTTGAGGTCTTGGCAACTCAGGAGGAAAAAGATGGGGAGGTACCTAGGGTTTTGCAGCGGTACACAGCTGAAAAACTCTCATGCTTTGGAGAACTTGCTCTAATGTACAATAAACCACTCCAGGCTTCTGTACGTGCTGTAACAAAAGGAACTCTTTGGGCTTTGAAGCGAGAAGATTTTCGAGGGATTTTAATGTCAGAATTCTCTAATTTATCATCCTTGAAGTTGCTTCGGTCTGTAGATCTTCTCTCAAGGTTGTCAATTTTACAACTCAGCCAGATTTCTGACTCCCTATCTGAAGTTTCCTTCTCAAGTGGGCAGACAATAGTTGACAAAAACGAAGTCCTTGCATTGTACATTATCCAGAAAGGACAAGTGAAAATCACTTTTGATGCTGATTTATTGACTAGTCCAAATGCCAGCAGCCTCAAGCCTGACATCCAAAATGAGGAGGAAGATGTGCAGAGCAGAAGAGAACTGTCAATAGAGAAGCCTGAGGGAAGCTATTTCGGTGAATGGGCCCTTCTTGGTGAACATATTGGTTCCTTAAGTGCAGTTGCTGTGGGTGATGTTGTATGTGCTTTACTAACAAAGGACAAATTTGAATCTGTTATTGGTTCCTTACAAAAGATTTCTCAGGAAGATCACAAGTTGAGGGATAGTTCCAAGGAGTTGAGTAGAAATTTTGATTTTTCATCCCTCGATAAAGTCCAGCTCTCAGATTTGGAGTGGAGAAAGACCGTATGTTCCACTGATTGCTCTGAGATAGGGCTTGCAAATTTAAGAGATTCAGAAAATGTGCTTAGTTTAAAGAGATTTTCTAAGCCGAAGGTGAAAAGGCTAGGAAAGGAATCACAAGTTTTAAAAGAGAAAGATTTAATCAAGGGTGTGAGCTCTTCAGCCTGTATACCTCAGGTTTTATGCACTTGTGCTGACCGCATATATTGTGGAATACTGCTAAATACATGCCTCGCTTGCCCTTTGTCTTCCATACTGTCAAGTCCTTTCAGTGAATCAGCAGCACAATTTTGCGCTGCTTCTGTTGTTACTGCCTTGGAAGACTTGCACAAGAATGGTGTTCTCTACAGAGGTGTGTCGCCTGAAGTTTTGATGTTCAAGCAAACAGGACAGATACAGCTGGTGGACTTCAGATTTGGAAAGAAGCTCGCTGGTGAGCGAACGTTCACAATTTGTGGGATGGCAGATTCACTAGCTCCAGAGATTGTTTTGGGAAAAGGCCATGGTTTCCCGGCTGACTGGTGGGCATTGGGAGTTTTAATATATTTTATGTTACGTGGTGAGATGCCATTTGGATCATGGAGAGAAAATGAACTTGATACAGTTGCCAAAATTGCAAAAAGGAAGCTACATCTTCCTGAGACTTTTAGCCCTGAAGCTGTTGATCTCATCTCCAAGTTACTTGAAGCAGAGGAAAACACTAGACTTGGTAGCCAAGGTCCTGATTCTGTCAAGAGTCACCCATGGTTTAATGGTATTGAATGGGAAGGGATTAGACACCACACTTTTCCTGTTCCACAAGAAATTATTTCTCGTATAGCACAATACGTGGAAGTTCATTCTGAGGATTGTACTGGTTATCCGGGGTCCCCATTACAGGAGGTAGAAGAACTTAATGTGCCTGAATGGCTTGAGGACTGGTAG 3204 0.4473 MGCIYSRVCIGDNCRGSSINGDPIVRTEVEGAFSTTSSDVQEAEIRDQLNQLSITRDSEAGIRRLARVSAQFLPPDGSRIVKVPSGNFELRYSFLSQRGYYPDALDKANQDSFCIHTPFGTSPNDHFFGVFDGHGEFGAQCSQFVKRKLCENLLRNSKFRVDPVEACHGAFLATNSQLHADVLDDSMSGTTAITVLVRGKTMYVANSGDSRAVVAERRGKDLVAVDLSIDQTPFRTDELERVKLCGARVLTLDQIEGIKNPEVQCWGSEEEGDDGDPPRLWVPNGMYPGTAFTRSIGDSIAETIGVVANPEIVVFELTQDHPFFVLASDGVFEFLSSQKVVEMVAKFKDPRDACAAIVAESYRLWLQYETRTDDITVIIVHPAAGQSASYGDVLRTPVPQVVEVTGSESPSTFGWNARNHRVRHDLSRARLRAIENTLENGQSWIPPSSAHRKTWEEEAHIEQALHDHFLFRKLTDSQCHVLLDCMQRVEVQPGDIIVKQGGESDCFYVVGSGEFEVLATQEEKDGEVPRVLQRYTAEKLSCFGELALMYNKPLQASVRAVTKGTLWALKREDFRGILMSEFSNLSSLKLLRSVDLLSRLSILQLSQISDSLSEVSFSSGQTIVDKNEVLALYIIQKGQVKITFDADLLTSPNASSLKPDIQNEEEDVQSRRELSIEKPEGSYFGEWALLGEHIGSLSAVAVGDVVCALLTKDKFESVIGSLQKISQEDHKLRDSSKELSRNFDFSSLDKVQLSDLEWRKTVCSTDCSEIGLANLRDSENVLSLKRFSKPKVKRLGKESQVLKEKDLIKGVSSSACIPQVLCTCADRIYCGILLNTCLACPLSSILSSPFSESAAQFCAASVVTALEDLHKNGVLYRGVSPEVLMFKQTGQIQLVDFRFGKKLAGERTFTICGMADSLAPEIVLGKGHGFPADWWALGVLIYFMLRGEMPFGSWRENELDTVAKIAKRKLHLPETFSPEAVDLISKLLEAEENTRLGSQGPDSVKSHPWFNGIEWEGIRHHTFPVPQEIISRIAQYVEVHSEDCTGYPGSPLQEVEELNVPEWLEDW* 1068
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr6g1154 1067 Gene3D - 86 381 IPR036457 -
Apr6g1154 1067 SMART serkin_6 764 1010 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr6g1154 1067 PRINTS cAMP-dependent protein kinase signature 491 505 - -
Apr6g1154 1067 PRINTS cAMP-dependent protein kinase signature 506 520 - -
Apr6g1154 1067 PRINTS cAMP-dependent protein kinase signature 541 550 - -
Apr6g1154 1067 PRINTS cAMP-dependent protein kinase signature 715 727 - -
Apr6g1154 1067 ProSiteProfiles PPM-type phosphatase domain profile. 91 382 IPR001932 -
Apr6g1154 1067 PANTHER CYCLIC NUCLEOTIDE-DEPENDENT PROTEIN KINASE 34 1067 - -
Apr6g1154 1067 Pfam Protein phosphatase 2C 121 361 IPR001932 -
Apr6g1154 1067 SUPERFAMILY Protein kinase-like (PK-like) 749 1040 IPR011009 -
Apr6g1154 1067 SMART PP2C_4 87 380 IPR001932 -
Apr6g1154 1067 Pfam Cyclic nucleotide-binding domain 615 719 IPR000595 -
Apr6g1154 1067 Pfam Cyclic nucleotide-binding domain 489 580 IPR000595 -
Apr6g1154 1067 ProSiteProfiles cAMP/cGMP binding motif profile. 596 720 IPR000595 -
Apr6g1154 1067 ProSitePatterns PPM-type phosphatase domain signature. 127 135 IPR000222 GO:0043169
Apr6g1154 1067 Gene3D Jelly Rolls 586 735 IPR014710 -
Apr6g1154 1067 Gene3D Jelly Rolls 445 585 IPR014710 -
Apr6g1154 1067 SUPERFAMILY PP2C-like 79 381 IPR036457 -
Apr6g1154 1067 PANTHER PROTEIN PHOSPHATASE 2C AND CYCLIC NUCLEOTIDE-BINDING/KINASE DOMAIN-CONTAINING PROTEIN 34 1067 - -
Apr6g1154 1067 Pfam Protein kinase domain 773 1010 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr6g1154 1067 SUPERFAMILY cAMP-binding domain-like 588 723 IPR018490 -
Apr6g1154 1067 SUPERFAMILY cAMP-binding domain-like 435 580 IPR018490 -
Apr6g1154 1067 ProSiteProfiles Protein kinase domain profile. 756 1010 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr6g1154 1067 Gene3D Transferase(Phosphotransferase) domain 1 841 1026 - -
Apr6g1154 1067 Gene3D Phosphorylase Kinase; domain 1 754 840 - -
Apr6g1154 1067 CDD CAP_ED 470 579 IPR000595 -
Apr6g1154 1067 CDD CAP_ED 596 720 IPR000595 -
Apr6g1154 1067 ProSiteProfiles cAMP/cGMP binding motif profile. 470 579 IPR000595 -
Apr6g1154 1067 CDD PP2Cc 107 381 IPR001932 -
Apr6g1154 1067 SMART cnmp_10 470 593 IPR000595 -
Apr6g1154 1067 SMART cnmp_10 596 734 IPR000595 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr6g1154 Apr-Chr6 16185542 16194101 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr6g1154 1 1067 PP2C-type Phosphatase Gene Family AT2G20050 68.522 0.0 1498
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_PKA-PKG Apr6g1154 Pkinase 9.3e-33 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr6g1154 - - gmx:100799821 1938.31