Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr6g1151 ATGGCTTCTACAATTCGCCCCTCACTTTCTTCCTTCATGTTACCCTCTCTCCCTTCTTGCAACCCTTCTCAAAAGCTCTCTCTTTTGCATCTTGGTAGCGGTAAGCCAAACTCATATAATTTTGGCTTGAAAGCATCAAGGTTGTTGAGACACGATGATGGTAACTGCATGGGAGTGATGGCATGTGGGAATCTGTCCCCAGCTGCTACACAGGAAAATGTACTAGATTGGGTCAAACATGACAAGAGAAGAATGCTTCATGTTGTGTATCGTGTTGGGGATTTGGACAAGTCCATAAAATTTTATACAGAGTGCCTGGGAATGAAGTTGCTTAGAAGACGTGACATGCCAGAGCAGAGATATACCAATGTGTTTCTTGGATATGGACCTGAGGATGCACACTTTGTTATTGAACTGACATACAATTATGGGATTGACTACTATGACATTGGAACTGGATTTGGCCATTTCGGTCTTGCTATTGATGATATTACAAGAATAGTGGAACTTGTCAGACTTAAGGGTGGCAAAATTATTAGAGAGCCAGGTCCTGTCAAGGGAGGCAGCTCAATAATTGCATTTATTGAAGATCCTGATGGTTATAAATTTGAACTAATAGAAAAAGCTCCCTCTCCTGAGCCTTTGTGCCAAGTCATGCTTCGGGTGGGTGATCTTGATCGTTCAATTAAATTTTATGAGAAGGCCTTCGGTATGGAGCTACTTCGAACAATAGATAATCCAGAATATAAGTATGCCATAGCAATGATGGGTTATGGTCCTGAAGAAAAAAATACAGTTCTGGAGCTGACTTACAATTATGGTGTCACTGAATATGACAACGGAGATGCTTATGCTCAGATTGCAATAGGTACAGATGACGTGTACAAAACTGCAGAAGCAATCAAACTAGCTGGAGGGAAGATTACTCGCGAAGCTGGACTAGTACCTGGTTTCAGGACAAAGATAGCATCATGTGTGGATCCTGATGGTTGGAAAACTGTTTTTGTAGATAACATTGACTTTTGTAGGGAGGTGGAGTAG 1041 0.415 MASTIRPSLSSFMLPSLPSCNPSQKLSLLHLGSGKPNSYNFGLKASRLLRHDDGNCMGVMACGNLSPAATQENVLDWVKHDKRRMLHVVYRVGDLDKSIKFYTECLGMKLLRRRDMPEQRYTNVFLGYGPEDAHFVIELTYNYGIDYYDIGTGFGHFGLAIDDITRIVELVRLKGGKIIREPGPVKGGSSIIAFIEDPDGYKFELIEKAPSPEPLCQVMLRVGDLDRSIKFYEKAFGMELLRTIDNPEYKYAIAMMGYGPEEKNTVLELTYNYGVTEYDNGDAYAQIAIGTDDVYKTAEAIKLAGGKITREAGLVPGFRTKIASCVDPDGWKTVFVDNIDFCREVE* 347
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr6g1151 346 ProSiteProfiles Vicinal oxygen chelate (VOC) domain profile. 84 208 IPR037523 -
Apr6g1151 346 ProSitePatterns Glyoxalase I signature 1. 217 238 IPR018146 GO:0004462|GO:0046872
Apr6g1151 346 PANTHER LACTOYLGLUTATHIONE LYASE-LIKE PROTEIN 11 346 - -
Apr6g1151 346 SUPERFAMILY Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase 215 338 IPR029068 -
Apr6g1151 346 Gene3D - 57 210 IPR029068 -
Apr6g1151 346 Pfam Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 217 332 IPR004360 -
Apr6g1151 346 Pfam Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 85 205 IPR004360 -
Apr6g1151 346 Gene3D - 211 345 IPR029068 -
Apr6g1151 346 ProSiteProfiles Vicinal oxygen chelate (VOC) domain profile. 214 338 IPR037523 -
Apr6g1151 346 TIGRFAM glyox_I: lactoylglutathione lyase 72 217 IPR004361 GO:0004462|GO:0046872
Apr6g1151 346 TIGRFAM glyox_I: lactoylglutathione lyase 215 338 IPR004361 GO:0004462|GO:0046872
Apr6g1151 346 ProSitePatterns Glyoxalase I signature 2. 151 163 IPR018146 GO:0004462|GO:0046872
Apr6g1151 346 PANTHER LACTOYLGLUTATHIONE LYASE 11 346 - -
Apr6g1151 346 CDD GlxI_Ni 85 206 - -
Apr6g1151 346 SUPERFAMILY Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase 84 210 IPR029068 -
Apr6g1151 346 ProSitePatterns Glyoxalase I signature 1. 87 108 IPR018146 GO:0004462|GO:0046872
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr6g1151 Apr-Chr6 16169896 16173036 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr6g1151 215 335 Calmodulin-binding Proteins AT1G08110 27.211 8.68e-10 56.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr6g1151 K01759 - gmx:100781439 578.556
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr2g1399 2 20068642 20072850 Apr6g1151 6 16169896 16173036 PCT