Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr6g1150 ATGGAGCGCATCATCGGCGCCAAGTACAAGCTAGGTCGCAAGATCGGAAGTGGATCCTTCGGTGAAATCTACCTCGCCACGCATATCGATACCTTCGAGATCGTCGCCGTCAAGATCGAGAACGGTAAAACGAAGCATCCGCAATTGCTTTATGAAGCCAAGCTTTACAATATTCTTCAAGGAGGAAGTGGCATTCCGAGCATAAAATGGTGTGGTGTAGATGGGGAGGATAATGTGCTTGTTATGGATTTGCTGGGGCCTAGTCTTGAGGATCTTTTTGTATACTGTGGAAGAAAGTTCTCCCTCAAAACCGTATTGATGTTGGCTGATCAAATGATGACAAGAATAGAATATGTGCATTCTAAAGGATTCCTACATAGGGATATAAAACCTGATAACTTTCTCATGGGACTTGGTCGGAAGGCAAACCAGGTTTACATAATTGATTTTGGGCTTGCAAAACGATATCGGGACTCCACAACCAATCGCCACATCCCTTACAGGGAGAATAAAAACTTAACAGGAACTGCACGTTATGCTAGCTGTAACACTCATCTTGGGATTGAGCAAAGTCGTCGGGATGATTTGGAGTCACTAGGGTATGTGCTTCTGTACTTCCTCAGAGGAAGCCTTCCTTGGCAAAACCTAAAGGCTGCAACAAAGAAGCAGAAGTATGATAAAATATGTGAGAAGAAAGTATCAACTCCTATTGAGGTGTTATGCAAATCTCACCCTGTAGAGTTTGCTTCGTACTTTCATTACTGCCACTCGCTAACCTTTGATCAGCGACCTGATTATGGATTCTTGAAGCGCCTATTTCGGGACCTATTTTCTCGGAAAGGTTATGAATTCGATTATGTATTTGACTGGACTATTTTAAAGTACCAACAGGCACAAAAGAACAGAGTTCAGCCTCACATATCTCCGGTCCCTGGAGCAAGCAATAGTCGTGCAATGCCCATGGATGTTGACCACCATCATGGGGATGTCTCAGCAGAGCGCATTAAATCGAGTAATGCTACTGGTTCTGGTGTTAAAATTCAGTTTAAATCACCAGTGGGTAAAAATTTGGGTTCTGAAAATCCTCTTGACAAGAATATTTTTAGTGAAGCAAATATACCCTCTGCCTCGTACACTTTAACTGGTGCCTCAAAAAGAAACTCCTTGAAACCTGCCTTGTCCACTGAAGCTGCCAACCATGGACATGGGCAAGGAAGTAGTAAAATCGGCCCTTCAAGTAGTTGGATTTCATCTCTGCAGCGCATATCTTCTGCCAAATGA 1281 0.4333 MERIIGAKYKLGRKIGSGSFGEIYLATHIDTFEIVAVKIENGKTKHPQLLYEAKLYNILQGGSGIPSIKWCGVDGEDNVLVMDLLGPSLEDLFVYCGRKFSLKTVLMLADQMMTRIEYVHSKGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAKRYRDSTTNRHIPYRENKNLTGTARYASCNTHLGIEQSRRDDLESLGYVLLYFLRGSLPWQNLKAATKKQKYDKICEKKVSTPIEVLCKSHPVEFASYFHYCHSLTFDQRPDYGFLKRLFRDLFSRKGYEFDYVFDWTILKYQQAQKNRVQPHISPVPGASNSRAMPMDVDHHHGDVSAERIKSSNATGSGVKIQFKSPVGKNLGSENPLDKNIFSEANIPSASYTLTGASKRNSLKPALSTEAANHGHGQGSSKIGPSSSWISSLQRISSAK* 427
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr6g1150 426 ProSitePatterns Protein kinases ATP-binding region signature. 15 38 IPR017441 GO:0005524
Apr6g1150 426 SMART serkin_6 9 277 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr6g1150 426 ProSitePatterns Serine/Threonine protein kinases active-site signature. 124 136 IPR008271 GO:0004672|GO:0006468
Apr6g1150 426 ProSiteProfiles Protein kinase domain profile. 9 277 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr6g1150 426 SUPERFAMILY Protein kinase-like (PK-like) 5 290 IPR011009 -
Apr6g1150 426 Gene3D Transferase(Phosphotransferase) domain 1 1 334 - -
Apr6g1150 426 Pfam Protein kinase domain 9 227 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr6g1150 426 MobiDBLite consensus disorder prediction 303 324 - -
Apr6g1150 426 PANTHER CASEIN KINASE 1-LIKE PROTEIN 3 1 409 - -
Apr6g1150 426 MobiDBLite consensus disorder prediction 389 426 - -
Apr6g1150 426 CDD STKc_CK1_delta_epsilon 8 282 - -
Apr6g1150 426 PANTHER CASEIN KINASE-RELATED 1 409 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr6g1150 Apr-Chr6 16156953 16161102 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr6g1150 9 213 EF-hand Containing Proteins AT4G23650 29.858 8.67e-14 71.2
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CK1_CK1 Apr6g1150 Pkinase 2.5e-28 CL0016
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr2g1401 2 20085018 20090859 Apr6g1150 6 16156953 16161102 PCT