Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr6g1129 ATGTATAGACCATTCATGACATGCGATGATCCAAAAGGAGTTGTTGAGTGTGGGGCTATAAGGAAATTCAGGACCAGTTCTCATAAAATGAAGGACAAGACAAAATCACGGAAGACGGCTGAGACATCATTGGCAAACAAAACAGACAAAGAGAAGGTTTCAGAAGGGTCCATAGAAAGGTCTTTTGATCCATCATCCTTGCAGCTCATGGAGGTGTCTAGAGGAGCTCAAAGGTTGAACAACATGATTGATTCTTGGTCTAAGGGTCTGAGGTATGATGGAAGTTCTGAAGATATTGCAAAAGATTTGTTGAAGGGAGCTCTTGATCTTCAAGAATCTCTATTGATGCTGCGAAAGGTGCAAGAAGCTTCACAACATGTGGCTTATATGAAGAGAAAACAAAAGGAGAAAGCTGAAAGAGGCAGAATTGATGCAAAGGTGATTGATAGAACAGCACATTGTAATCAATTTGGTGAACAAAGTTGTCCAATGGGATTTCAAAGACCATGGACTTCAGCCGATGGTTCTTCTAGTAGTTGCACTGAGGAACTTAAGAAAGTGATTAAGGAGAGTCTGGTTGAGCAAAATCTATTGGCAACCACTGAAAGATTGGATTCAACTTCAGCATTTCACTCTACAAACTCAAGCCAATCTTCTGGTCTTTGGAATGATAGGCTTTCTGATTCTTCATTTTCACCAACAACTTCAAGGAAGGAAAGAGTACCCAATTTGGTTGCAAAGTTGATGGGCTTAGAAGAAGCCTCCTCAAGATCATTTCCAGCTGTTATGCAGAAACAGTTGGAGAGTCAAAAAATTCTGAATCAGAAGAGGCCTATATTTGAGATAGATATGCCCAAGGTGGGAAAAAACGTTGAGAAGGTTAATCCAGAACAAAAGAAGACCCTGAAAGAAATTCTTGAGACTACTCATTTCAGTGGACTTCTGAAGAAGAATTCAGTCAGAAAGCCTCAGTTTCATGTTCATCATTCCAGTGATCCTCATTGCAAACAGTTCAATGATTTACCTCCTATTGTGGTTATGAAACCTCGATGTGCTCCATATCAGGGATTTGTGAAAAATTATGAGCCTGTTGTTCATCCAGAAGAGTTATCCCTTAGAAATCTAAAAGCAAAAGCAGTTCCTTCCAAAACTATCAAACACAGAGAAGGTTCAACCACCAACATAGTGAAAGAAAAGGAAGAACATGTATCCAAAAGGCTTACCAAAGAGGAAAGAACTAAGCTCATCAAGGAGGTTGTGGAGCTGGAGGCAAAAGAAATCAAGCCTATTGAAAATGAGAAGGCTCCAGGAGCTAAGGTAAAACTGTATAGTCATATCAGTCACAAATCACAGGAAAATGAAACTCTTGATAAAAAAGCTAAGGTAAAGACCATTACCATTAGCAGAAAGGTGCCAGAGAAGGAGGTCTCAAAACCAAAAGTTGTGACAAAATCTCAAGAGCAAGGAGAAATCAGCTCTACAAGTACAAGGTTGAGGAAGCCACAAAGTGGGTCCAGAATTGACAAGAATGAGAATCCCAGCAGGAAGAGCACTGCTTCAAATTCAAACACCATCTCAAAATCAAAGAGTCAAAAAGTTAATAATTCCAAGGAACATAGAAAGAATCAGATGAAGAAGCAAAGGTCTGTTGCTGAGCCTGAAGCAGCCAAACCAGTTTTAGGACAAGAAGAAGAAGCAAAGAGTGTTAATGTTTCTAGCAAAGATGATTGCCCTGAGATTAGAATAATCACTACAATAACCGATGATCTCACCATGAAGCATGAAGAAGTAGATTCATCTGCAAATAAGATTAGAGAAAATTGTGGTCAAAGCCAGAGTTCTTCAGGTGATGATACTTTGATGCTAAAGTCTGAACATGAAAATGATGCCACCCCTTCTGAAGAAGCTCATGACAGCACCACCAATATCAGTGAAACCTTTTGCAAACCTGAGAAAGACAATTCTGAGCTGAAAAATTTGCTTCTAACAAGTCGATCATTTATTGGCCACGCAGAGGGGCTCTTCAACCTTGATGTGGATTGTCCTAAGATCCTACCAAGAAGTGAAACCAAGGAAATAGCCAATCTCAAACTCTATTTGGATTGTGCAAATGAACTCACCGAGTGTAAAAGTCTTCAGAAGTCACAAGCAGTTCACCCTTTATCACTAACTTGTCCAGGGAAATCAAGTTTACACATCTCTTTAGGTAGGTTGGTTGATGAAGTCTATAATGCAATTGACAATTTGACATCTTACAGTGAAAACACTGGGAACAAACTTGCTACAGATAATAATATCTATGCAATGATGGGGAGAGATATAAAGAGCAACAATGGACTTATAAATGGAATATGGAACTGGGGTTGGAGGCGTGGATTTTCTGCTGATGAAGCTGAGCAAGTTGTTAATGAAGTAGAGAACTTAGTTTTAAGTGGATTGATTGAGGAGGTAATTGTAAATTTATGA 2466 0.3925 MYRPFMTCDDPKGVVECGAIRKFRTSSHKMKDKTKSRKTAETSLANKTDKEKVSEGSIERSFDPSSLQLMEVSRGAQRLNNMIDSWSKGLRYDGSSEDIAKDLLKGALDLQESLLMLRKVQEASQHVAYMKRKQKEKAERGRIDAKVIDRTAHCNQFGEQSCPMGFQRPWTSADGSSSSCTEELKKVIKESLVEQNLLATTERLDSTSAFHSTNSSQSSGLWNDRLSDSSFSPTTSRKERVPNLVAKLMGLEEASSRSFPAVMQKQLESQKILNQKRPIFEIDMPKVGKNVEKVNPEQKKTLKEILETTHFSGLLKKNSVRKPQFHVHHSSDPHCKQFNDLPPIVVMKPRCAPYQGFVKNYEPVVHPEELSLRNLKAKAVPSKTIKHREGSTTNIVKEKEEHVSKRLTKEERTKLIKEVVELEAKEIKPIENEKAPGAKVKLYSHISHKSQENETLDKKAKVKTITISRKVPEKEVSKPKVVTKSQEQGEISSTSTRLRKPQSGSRIDKNENPSRKSTASNSNTISKSKSQKVNNSKEHRKNQMKKQRSVAEPEAAKPVLGQEEEAKSVNVSSKDDCPEIRIITTITDDLTMKHEEVDSSANKIRENCGQSQSSSGDDTLMLKSEHENDATPSEEAHDSTTNISETFCKPEKDNSELKNLLLTSRSFIGHAEGLFNLDVDCPKILPRSETKEIANLKLYLDCANELTECKSLQKSQAVHPLSLTCPGKSSLHISLGRLVDEVYNAIDNLTSYSENTGNKLATDNNIYAMMGRDIKSNNGLINGIWNWGWRRGFSADEAEQVVNEVENLVLSGLIEEVIVNL* 822
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr6g1129 821 MobiDBLite consensus disorder prediction 603 619 - -
Apr6g1129 821 PANTHER OS01G0228800 PROTEIN 1 819 - -
Apr6g1129 821 MobiDBLite consensus disorder prediction 472 573 - -
Apr6g1129 821 MobiDBLite consensus disorder prediction 620 634 - -
Apr6g1129 821 MobiDBLite consensus disorder prediction 532 552 - -
Apr6g1129 821 MobiDBLite consensus disorder prediction 482 501 - -
Apr6g1129 821 MobiDBLite consensus disorder prediction 597 648 - -
Apr6g1129 821 MobiDBLite consensus disorder prediction 514 531 - -
Apr6g1129 821 MobiDBLite consensus disorder prediction 207 238 - -
Apr6g1129 821 Coils Coil 405 425 - -
Apr6g1129 821 MobiDBLite consensus disorder prediction 26 59 - -
Apr6g1129 821 MobiDBLite consensus disorder prediction 34 58 - -
Apr6g1129 821 PANTHER OS01G0228800 PROTEIN-RELATED 1 819 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr6g1129 Apr-Chr6 15955281 15959319 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr6g1129 1 252 TRM (TON1 Recruiting Motif) Superfamily AT3G24630 36.630 8.49e-29 121
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr6g1129 - - gmx:100797863 1205.66
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr2g1415 2 20224516 20227288 Apr6g1129 6 15955281 15959319 PCT