Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr6g1125 ATGGGGGAAGGTGAAGGTGAAGGAGGTGATTGCGCTCCGAGGAATGTTTCGTCGTCGGTGGCTGAAGTTGTGGTATCGGCGGCGGTAGCAACGGCTTCGTTGGATGCTCCGGCGAAGAAGCTGGCGAGGCAGCTCGATTTCACCGGCATGCCGGAACATGCGCAATCGCAGCCGCAGACTGTGACGCAGCAACCGGTGGTGGTGTTGCCGTTTCCGCCGCAGGCGCCGCTTGCTTCTGCAAGGGTTGGGAAACCAGAATCTCCAAAATCAAAATCAAGACCTAACTTTGAGATGAAGGATGCTACCCCAAAGAAGCAAAAGCAGTGCAATTGTAAACACTCTAAATGCTTGAAGCTATATTGTGAATGTTTTGCATCGGGAATATATTGTGATGGTTGCAACTGTGTAAATTGTTTCAACAATGTTGAAAATGAAGCTGCTAGACGAGAAGCTGTTGAAGCTACCTTGGAACGCAATCCAAATGCATTTCGGCCCAAAATTGCAAACAGTCCTCACGGAGCACGTGATAGCAGGGAGGAGGTTGGAGAAGGTTTAATATTAGGAAAACATAACAAGGGGTGTCATTGTAAAAAATCTGGGTGCCTAAAGAAGTACTGCGAATGCTTCCAAGCCAACATTCTTTGTTCTGAAAATTGTAAATGCATGGACTGCAAGAATTTTGAGGGAAGTGAAGAGAGGCAGGCTTTGTTTCATGGAGATCAAAATAACAACATGGCATATATTCAGCAAGCGGCAAATGCTGCCATAACTGGAGCTATTGGTTCCTCTGGCTACTCATCACCTCCAGTATCAAAGAAAAGAAAAGGTCAGGAACTCTTCTTTTGGCCAACAGCCAAGGATCCATCCATTAGCAAGTTGGGACAACAGGTAAACCATGTCAAAGGTCCAATTGCACCCTCCTCATCCTTGTCACCTGCCCCAGGTGCTCGTGTTGGAACTGCAACATTAGGTCCTTCAAAATTTATGTACAGGTCTCTTTTAGCTGACATTATACAACCACAACACCTCAAGGAGCTTTGCTCAGTTCTGGTGCTAGTATCCGGACAAACTGCAAAGACACTTACAGACCAGAAAATTTTAATGGAAAAGCATACAGAAGATCACACAGACACTTCCCTTGCTTCTTCAACTCAAGAGCAATTACCAAGTCAAAAGGAAGGTGATATTGAGAAGGCTATGGCTGATGATTGTTTGAGTGCAAACCAAACAGATAAAATCAGCCCAGAAAATTCCAGTTCAGATGGCGCTGATGTCCCCAAAGGGAGGCCAATGTCTCCTGGGACTTTAGCCTTGATGTGTGATGAGCAAGATACAATGTTCATGACAGCTGCCTCCCCCACTGGGCCAATGACCCATGCTTGCAATACAACTTCACAATTTCCTTATGGGCAAGGAATGACACAGGTTTATGCAGAGCAAGAAAGGATTGTTTTAACTAAGTTTAGAGATTTTCTCAATAGGGTTATCACTATGGGAGAAATAAATGAAACAAAGTGTTCTTCGTTGGCCAGAAGTGAACTGGAGGGTCAAAAGGACCCAATCAGCAGCAATGGCGTTGAAAATTCCAGTACAGAGATAGTGCCTCAGCAGGGAGCCACTAGCAATGGTGTTACCAAAGCTGTTGTTCCACCCAGGTCCTCAACTTCATCGTCTATGATCCCTGGTAATGTTGCTGAAAATGGGGAGACCAAGCTGAAGATTGAAAAAGAGATATGA 1737 0.4537 MGEGEGEGGDCAPRNVSSSVAEVVVSAAVATASLDAPAKKLARQLDFTGMPEHAQSQPQTVTQQPVVVLPFPPQAPLASARVGKPESPKSKSRPNFEMKDATPKKQKQCNCKHSKCLKLYCECFASGIYCDGCNCVNCFNNVENEAARREAVEATLERNPNAFRPKIANSPHGARDSREEVGEGLILGKHNKGCHCKKSGCLKKYCECFQANILCSENCKCMDCKNFEGSEERQALFHGDQNNNMAYIQQAANAAITGAIGSSGYSSPPVSKKRKGQELFFWPTAKDPSISKLGQQVNHVKGPIAPSSSLSPAPGARVGTATLGPSKFMYRSLLADIIQPQHLKELCSVLVLVSGQTAKTLTDQKILMEKHTEDHTDTSLASSTQEQLPSQKEGDIEKAMADDCLSANQTDKISPENSSSDGADVPKGRPMSPGTLALMCDEQDTMFMTAASPTGPMTHACNTTSQFPYGQGMTQVYAEQERIVLTKFRDFLNRVITMGEINETKCSSLARSELEGQKDPISSNGVENSSTEIVPQQGATSNGVTKAVVPPRSSTSSSMIPGNVAENGETKLKIEKEI* 579
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr6g1125 578 MobiDBLite consensus disorder prediction 371 394 - -
Apr6g1125 578 SMART CXC_2 189 230 IPR033467 -
Apr6g1125 578 SMART CXC_2 104 144 IPR033467 -
Apr6g1125 578 MobiDBLite consensus disorder prediction 516 564 - -
Apr6g1125 578 MobiDBLite consensus disorder prediction 408 436 - -
Apr6g1125 578 ProSiteProfiles CRC domain profile. 105 229 IPR005172 -
Apr6g1125 578 PANTHER PROTEIN TESMIN/TSO1-LIKE CXC 5 ISOFORM X1 56 557 - -
Apr6g1125 578 MobiDBLite consensus disorder prediction 516 578 - -
Apr6g1125 578 Pfam Tesmin/TSO1-like CXC domain, cysteine-rich domain 106 141 IPR005172 -
Apr6g1125 578 Pfam Tesmin/TSO1-like CXC domain, cysteine-rich domain 192 226 IPR005172 -
Apr6g1125 578 MobiDBLite consensus disorder prediction 77 99 - -
Apr6g1125 578 PANTHER TESMIN/TSO1-RELATED 56 557 IPR028307 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr6g1125 Apr-Chr6 15917975 15927383 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr6g1125 37 535 CPP Transcription Factor Family AT4G29000 56.434 0.0 564
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF CPP Apr6g1125 TCR 3.1e-12 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr6g1125 - - gmx:100777698 919.842