Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr6g1114 ATGAGTGTGATTGGAAAATCGATGCCGCGATCAAATTCGGCCGTGCACCACCACCGTCAGAGCTCCGATAACTTCATCCTCGACTCAACCTCTCACGGAAGATGGTTTCATTCCTCTGCTTTCGCACATTTGGATACAAAACGAGCTAAATTTCGATTTGTGTTCGGAACGAATCGTTTTATGCAGGAGTTTGGAACTCGATCTTCGAGCTTGAGGAGAAACGACGACGATCGTGTGTTGAGCAGTGGCTTGCTTGACTTGCATTCCTTCGATACCGAGCTTTTACCCGAGGTTTGGTGTATGTATGATGTTCAAAATGAATATTTATCGAGTCGAGGACAAAGTTTTGATGAGTCTGACTCGATTCTCACCGGCAACAAATTCGCACAAAGGTCTCGGGGCTTGCCTGAGAGTCATCTTCTTAGAAGTGTCACAACTGATAAAGAGAGAGCAAACAATGTTGCCAAGATCAAAGTCGTGGTTCGGAAGAGACCACTAAATAAGAAGGAAATAGCAAAGAAAGAGGAAGACATTATTACCATAGATTCAAATTATCTTACAGCGCACGAAAGAAAACTCAAGGTTGATTTAACAGAATATGTTGAGAAACATGAGTTTGTTTTTGATGCTGTACTGAATGAAGACGTTTCAAATGATGAAGTGTATGCTGAGACTGTGGAGCCAATTGTTCCACTGATTTTCCAACGAACAAAAGCAACTTGCTTTGCATATGGTCAAACTGGGAGTGGGAAAACATATACTATGCAACCATTGCCTCTCAAAGCATCCCACGATATCTTACGATTAATGCAGCACACATACAGAAATCAAGGTTTCCAATTATTTGTTAGTTTCTTTGAAATATACGGGGGGAAACTTTTTGATCTCCTCAATGATCGAAAAAAACTTTGCATGAGGGAGGATGGGAAACAGCAGGTTTGCATTGTTGGCTTGCAAGAATATAGAGTGTCTAAAGTTGAGACAATCAAGGATTTTATTGAGAAAGGAAATAGCACAAGAAGTACTGGGACAACTGGTGCAAATGAGGAATCCTCTCGATCACATGCTATACTTCAGCTCTGTATCAAAAGATCAGCTGATGGGACTGAATCAAAGCCTGCTCGAATAGTGGGCAAACTCTCTTTTATAGATCTTGCTGGAAGTGAACGTGGTGCAGATACTACTGATAATGATAAGCAGACTAGGATTGAGGGAGCTGAAATTAATAAAAGCTTACTTGCTCTGAAAGAATGCATTAGAGCTCTAGACAATGACCAAGGGCATATCCCTTTCAGAGGAAGTAAATTGACTGAAGTTCTGCGAGACTCTTTTGTTGGTGATTCACGCACTGTAATGGTATCATGTATTTCACCAAGCTCAGGTTCTTGTGAGCACACACTTAACACATTAAGATATGCCGACAGAGTAAAGAGCCTGTCAAAAGGGAACAGCTCCAGAAGGGATCCCCTTTCTTCTTCAAACCTTAGAGACTCAACTGTATTGCCTGGATCTTCAGTTTTATCTCATGATGATGCCTTTGAAGATGAAATAGCATTTGTTTCCAGCGAGAGAAATCGATTTGGTTGGCCCAAACAGCTTGAAAGAGAGCCCTCCCCTCCAAATAATGTGGATAGGGTTCCAAAACCTCATGTTAAACATGTGGATGTATCGCTTTTTGAGGCTAATCATTCTGACCCTGATGATGATTTAAATGCCCTCTTGAAGGAAGAGGAAGATCTTGTAACTGCTCACCGGAGACAAGTTGAGGAAACAATAGATATTGTTAGGGAGGAGATGAATTTACTTGTTGAAGCTGACCAACCAGGAAATCAGTTAGATGATTATATTGCCAAATTGAATACCATTTTATCACAAAAGGCTGCAGGGATCTTTCAATTGCAGACGCAGTTGGCTCAATTTCAAAAACGTTTAAATGAGTATAATGTCTTTGTATCTTCTGGTAATTGA 1968 0.408 MSVIGKSMPRSNSAVHHHRQSSDNFILDSTSHGRWFHSSAFAHLDTKRAKFRFVFGTNRFMQEFGTRSSSLRRNDDDRVLSSGLLDLHSFDTELLPEVWCMYDVQNEYLSSRGQSFDESDSILTGNKFAQRSRGLPESHLLRSVTTDKERANNVAKIKVVVRKRPLNKKEIAKKEEDIITIDSNYLTAHERKLKVDLTEYVEKHEFVFDAVLNEDVSNDEVYAETVEPIVPLIFQRTKATCFAYGQTGSGKTYTMQPLPLKASHDILRLMQHTYRNQGFQLFVSFFEIYGGKLFDLLNDRKKLCMREDGKQQVCIVGLQEYRVSKVETIKDFIEKGNSTRSTGTTGANEESSRSHAILQLCIKRSADGTESKPARIVGKLSFIDLAGSERGADTTDNDKQTRIEGAEINKSLLALKECIRALDNDQGHIPFRGSKLTEVLRDSFVGDSRTVMVSCISPSSGSCEHTLNTLRYADRVKSLSKGNSSRRDPLSSSNLRDSTVLPGSSVLSHDDAFEDEIAFVSSERNRFGWPKQLEREPSPPNNVDRVPKPHVKHVDVSLFEANHSDPDDDLNALLKEEEDLVTAHRRQVEETIDIVREEMNLLVEADQPGNQLDDYIAKLNTILSQKAAGIFQLQTQLAQFQKRLNEYNVFVSSGN* 656
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr6g1114 655 Gene3D Kinesin motor domain 137 482 IPR036961 -
Apr6g1114 655 SMART kinesin_4 154 485 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Apr6g1114 655 CDD KISc_KIF2_like 156 477 - -
Apr6g1114 655 PRINTS Kinesin heavy chain signature 236 257 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Apr6g1114 655 PRINTS Kinesin heavy chain signature 345 362 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Apr6g1114 655 PRINTS Kinesin heavy chain signature 379 397 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Apr6g1114 655 PRINTS Kinesin heavy chain signature 429 450 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Apr6g1114 655 Coils Coil 585 605 - -
Apr6g1114 655 MobiDBLite consensus disorder prediction 483 500 - -
Apr6g1114 655 PANTHER KINESIN-RELATED PROTEIN 6 66 550 - -
Apr6g1114 655 PANTHER KINESIN-RELATED PROTEIN 6 552 653 - -
Apr6g1114 655 MobiDBLite consensus disorder prediction 478 500 - -
Apr6g1114 655 Pfam Kinesin motor domain 162 478 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Apr6g1114 655 ProSitePatterns Kinesin motor domain signature. 378 389 IPR019821 GO:0003777|GO:0005524|GO:0007018
Apr6g1114 655 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 153 479 IPR027417 -
Apr6g1114 655 ProSiteProfiles Kinesin motor domain profile. 156 479 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Apr6g1114 655 PANTHER KINESIN-LIKE PROTEIN 66 550 - -
Apr6g1114 655 PANTHER KINESIN-LIKE PROTEIN 552 653 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr6g1114 Apr-Chr6 15792711 15798764 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr6g1114 155 479 Calmodulin-binding Proteins AT5G65930 34.328 1.17e-44 170
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr6g1114 K10393 - gmx:100783382 987.252
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr6g1114 6 15792711 15798764 Apr6g1114 6 15792711 15798764 ECH