Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr6g1108 ATGGAAAATCTCAACAATGGCAACAGCCACATAGACCCTTTTGTCAAGATTCCAACACTCAAGTTTACTAAGCTTTTCATCAATGGAGAATTCGTAGATTCTGTTTCAGGAAAAACGTTTGAGACAGTTGATCCAAGAACAGAGGAAGTGATGGCTGAAATAGCAGAGGCTACCGAAGAAGATGTTGATATTGCTGTGAAGGCCGCACGTGAGGCATTTGATTTTGGTCCATGGCCACGCATGACCGGTGCAGAGAGAGCAAAGATTATGTTGAAGTGGGCAGAGCTAATTGAACAGAACATTGAAGAAATAGCAGCATTGGATACCATTGATGGAGGAAAGTTATATAGTTGGTGTAAGGCTGTGGACATTCCTGAAGCATGCAACATCCTACGTTACTATGCTGGCGCTGCTGATAAAATTCATGGACAAGTGTTCAAAACATCACGGGACCTCCACTTGTATACACTCATGGAACCTATTGGTGTTGTTGGACACATTATCCCTTGGAATTTCCCTACCATCATGTTCTTCACCAAGTCTAGCCCTGCCTTGGCTGCTGGCTGCACCATGATCATCAAGCCTTCTGAGCAAACACCTCTCTCTGCACTCTTCTGTGCTCATCTTGCTAAGTTGGCTGGTATCCCAGATGGGGTGATCAATGTACTAACCGGATTTGGCTCAACTGGAGCTGCAATAAGCTCACATATGGACATTGATGCGGTCAGTTTCACTGGTTCAACAGAAACAGGTCGAAAAATAATGCAGGCAGCGGCAATGAGCAATTTGAAACCTGTTTCACTTGAATTAGGAGGCAAATCGCCAGTTTTAATTTTTGATGATGCTGATGTTGACAAGGCTGTTGAACTTGCACTCTTTGGCATCCTATTAAACAAGGGAGAAATGTGTGTTGCATTTTCCAGAGTTTTCGTCCAGGAAGGGATTTATGATGAATTTGAGAAGAAGGTAGTGGAGAAAGCAAAAACTTGGGTTGTGGGGGACCCTTTTGATCCTCAAGTTCAACAAGGACCTCAAACTAGCAAGGCACAATATGATAAAATTCTTTCCTATATTGAGCAAGGAAATAGAGAAGGAGCCACATTATTGACTGGGGGTAAGCCTGTGGGCAACAAGGGATACTACATTGAGCCTACTATTTTTGCCAATGTTAAGGAGGACATGATAATAGCACAAGATGAAATATTTGGACCTGTAATGGCACTTTCTAAGTTCAAGACCATTGAGGAAGCAATTAGTAAAGCCAATAGCACCAAATACGGCCTAGCAGCAGGGATTGTGACCAAGAACTTGGATATTGCTAACACTGTCTCAAGGTCCATCCGTGCAGGCATCATATGGATCAACTGCTTCTTTGCCTTTGATATTGATTGCCCTTTTGGAGGCTATAAAATGAGTGGATTTGGAAGAGATTATGGATTGGAAGCACTTCACAAGTTTCTTCAAGTCAAATCTGTTGCAACTCCTATTTACAATTCTCCTTGGCTTTGA 1509 0.4261 MENLNNGNSHIDPFVKIPTLKFTKLFINGEFVDSVSGKTFETVDPRTEEVMAEIAEATEEDVDIAVKAAREAFDFGPWPRMTGAERAKIMLKWAELIEQNIEEIAALDTIDGGKLYSWCKAVDIPEACNILRYYAGAADKIHGQVFKTSRDLHLYTLMEPIGVVGHIIPWNFPTIMFFTKSSPALAAGCTMIIKPSEQTPLSALFCAHLAKLAGIPDGVINVLTGFGSTGAAISSHMDIDAVSFTGSTETGRKIMQAAAMSNLKPVSLELGGKSPVLIFDDADVDKAVELALFGILLNKGEMCVAFSRVFVQEGIYDEFEKKVVEKAKTWVVGDPFDPQVQQGPQTSKAQYDKILSYIEQGNREGATLLTGGKPVGNKGYYIEPTIFANVKEDMIIAQDEIFGPVMALSKFKTIEEAISKANSTKYGLAAGIVTKNLDIANTVSRSIRAGIIWINCFFAFDIDCPFGGYKMSGFGRDYGLEALHKFLQVKSVATPIYNSPWL* 503
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr6g1108 502 Gene3D Aldehyde Dehydrogenase; Chain A, domain 2 272 461 IPR016163 GO:0016620
Apr6g1108 502 PANTHER ALDEHYDE DEHYDROGENASE-RELATED 6 502 - -
Apr6g1108 502 Pfam Aldehyde dehydrogenase family 31 492 IPR015590 GO:0016491
Apr6g1108 502 ProSitePatterns Aldehyde dehydrogenases glutamic acid active site. 268 275 IPR029510 GO:0016491
Apr6g1108 502 ProSitePatterns Aldehyde dehydrogenases cysteine active site. 296 307 IPR016160 GO:0016491
Apr6g1108 502 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 27 490 IPR016162 GO:0016491
Apr6g1108 502 SUPERFAMILY ALDH-like 15 498 IPR016161 GO:0016491
Apr6g1108 502 PANTHER CYTOSOLIC ALDEHYDE DEHYDROGENASE 6 502 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr6g1108 Apr-Chr6 15756038 15759606 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr6g1108 4 502 Aldehyde Dehydrogenase Gene Family AT3G24503 68.064 0.0 717
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr6g1108 K12355 - gmx:100784449 909.057
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr2g1429 2 20333680 20339267 Apr6g1108 6 15756038 15759606 PCT