Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr6g1106 ATGAATTCCCCTATCTCATTTATCTCATATCCTCCCTCAATAGTTTCTTCAACTTGCTTTGTTCCCACTTCATTGTCCTACACCAACATGGCTGATCAGGACTTCAAAATGCCCACCATCAAGTTCACCAAGCTCTTCATCAATGGAGATTTTGTTGATTCTCTTTCAGGACGAGAATTTGAGACAATAGACCCAAGAACGGGAGAGGTAATTGCAAGGGTGGCAGAAGGAAAAAAAGAAGACATTGATGTTGCTGTGAAAGCTTCTCGTGTGGCTTTTGACTATGGTCCATGGCCCCGCATGCCCGGCGCGGAAAGAGCAAGAATTATGATGAAATGGGCAGATCTAATTGATCAAAATGTAGAAGAATTAGCAGCACTAGATGCCATTGATGCTGGAAAGTTGTACCATCGGTGTAAGGCTCTTGAAATTCCTTCAGCAGCAAATACTATACGTTACTATGCTGGTGCTGCTGATAAAATTCATGGAGAGGTCTTAAAACCTCCTAGAGAGTTGCATGCATATACTTTACTAGAACCAATTGGTGTTGTGGGACATATCATTCCTTGGAATTTCCCTACTTCCATGTTTTTCACCAAGGTTAGTCCTGCATTGGCTGCTGGTTGCACTATGGTCCTCAAGCCTGCAGAACAAACACCTCTCTCAGCTTTGTTTTATGCTCATTTAGCTAAGCTGGCTGGAATTCCAGATGGAGTACTCAATGTGGTTCCTGGATTTGGCCCAACTGCAGGTGCTGCAATAAGTTCACACATGGACATCGATATGGTCAGCTTTACTGGTTCAACAGAAATAGGCCGTGAAATAATGCGTGCTGCAGCTAACAGTAATTTGAAACCAGTTTCACTTGAATTAGGAGGCAAGTCACCCATCGTAATTTTTGATGATGCTGATATAAATAAAGCCGTTGAGCTTGCTCTCTTAGGTGTTGTATTTAACAAGGGAGAAATTTGTGTTGCGGGGTCTCGTGTATTTGTTCAGGAAAGAATCTATGATGAATTTGAGAAAAAGTTGGTGGAAAAGGCAAAAGCTTGGGTGGTTGGGGATCCTTTTGATCCTAAAGTTCAGCAAGGTCCTCAGGTTGACAAAAAGCAATTTGAAAAAATTCTCTCTTATATTGAGCATGGAAAAAGAGAAGGAGCCACCCTTTTGACAGGGGGAAAAAGACTAGGCAACAAGGGATACTACATTGAGCCTACAATTTTCTCCAATGTTAAGGAGGACATGCTTATCGCAAAGGATGAAATATTTGGTCCCGTGATGGCACTGATGAAATTTAAAACCATGGAGGAAGCAATTAAAAGTGCCAACAACACGAGATATGGCTTAGCTGCAGGAATTGTGACAAAAAACATAGATACAGCAAATACTATGTCAAGGTCGATTCGTGCAGGCATTGTTTGGATCAACTGTTATCTTGCCTTTGGGAATGATATTCCTTATGGAGGTTATAAGATGAGTGGATTTGGAAGAGAATCAGGATCGGAGGCCCTCCACAAGTACTTACAAGTTAAATCTGTTGTAACACCCATTTACAATTCTCCTTGGCTTTGA 1572 0.416 MNSPISFISYPPSIVSSTCFVPTSLSYTNMADQDFKMPTIKFTKLFINGDFVDSLSGREFETIDPRTGEVIARVAEGKKEDIDVAVKASRVAFDYGPWPRMPGAERARIMMKWADLIDQNVEELAALDAIDAGKLYHRCKALEIPSAANTIRYYAGAADKIHGEVLKPPRELHAYTLLEPIGVVGHIIPWNFPTSMFFTKVSPALAAGCTMVLKPAEQTPLSALFYAHLAKLAGIPDGVLNVVPGFGPTAGAAISSHMDIDMVSFTGSTEIGREIMRAAANSNLKPVSLELGGKSPIVIFDDADINKAVELALLGVVFNKGEICVAGSRVFVQERIYDEFEKKLVEKAKAWVVGDPFDPKVQQGPQVDKKQFEKILSYIEHGKREGATLLTGGKRLGNKGYYIEPTIFSNVKEDMLIAKDEIFGPVMALMKFKTMEEAIKSANNTRYGLAAGIVTKNIDTANTMSRSIRAGIVWINCYLAFGNDIPYGGYKMSGFGRESGSEALHKYLQVKSVVTPIYNSPWL* 524
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr6g1106 523 Pfam Aldehyde dehydrogenase family 52 513 IPR015590 GO:0016491
Apr6g1106 523 PANTHER ALDEHYDE DEHYDROGENASE-RELATED 31 523 - -
Apr6g1106 523 ProSitePatterns Aldehyde dehydrogenases cysteine active site. 317 328 IPR016160 GO:0016491
Apr6g1106 523 PANTHER CYTOSOLIC ALDEHYDE DEHYDROGENASE RF2C 31 523 - -
Apr6g1106 523 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 47 511 IPR016162 GO:0016491
Apr6g1106 523 SUPERFAMILY ALDH-like 33 519 IPR016161 GO:0016491
Apr6g1106 523 ProSitePatterns Aldehyde dehydrogenases glutamic acid active site. 289 296 IPR029510 GO:0016491
Apr6g1106 523 Gene3D Aldehyde Dehydrogenase; Chain A, domain 2 293 482 IPR016163 GO:0016620
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr6g1106 Apr-Chr6 15732861 15737057 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr6g1106 36 523 Aldehyde Dehydrogenase Gene Family AT3G24503 71.575 0.0 739
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr6g1106 K12355 - gmx:100783920 894.034