Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr6g1100 ATGGGTTCCATGGATAAGTCTGAGGTTGATGATCGTTATCATGGGGTAAACTTCACGACCCAAAGAGGGTTTCGTGCAAAATTCAAATCTGGTTTGAAGGAAACGTTTTTTCCTGATGATCCCTTTAGGCAGTTCAAGAATGAAGAGAAGCCATTGCGAAGGGTCATCAAAGGGGTGCAATACTTTGTTCCAATCTTTGAGTGGTTACCCAATTACACTTGGCGCCTCTTTTGCTCTGATTTGATCGCTGGCTTAACCATCTCTAGCCTTGCCATCCCTCAAGGCATTAGCTATGCTAAACTCGCCAACCTTCCTCCCCTCATTGGTCTTTATTCTAGCTTTGTCCCACCTCTAGTATATGCTGTTTTTGGGAGTTCTAGGCACATGGCAGTGGGGACGATAGCGGCAGCATCATTGCTTATTGGTCAAACTATAGCAACAGTGGCAGACCCAGAAGAAGAGCCAACGTTGTTTCTTCATTTGATTTTCACAACCACCTTTATCACGGGCATATTCCAGGCTTGTCTGGGCGTTTTCAGGTTGGGTATACTGGTGGATTTCTTTTCCCATTCTACCATCAATGGATTCATGGGAGGGACAGCAATAATTCTCATCCTCCAACAACTAAAGGGCATTTTTGGCATGAAACACTTCTCTACCAAAACCAACGTGATAGCTGTAGTGAAGGCCATCCTCGCCAATAGACATGAGATAAGGTGGGAAACCACTGTTCTTGGCGTGATCTTCATTGCTTTCCTCCAATTTACTAGGCACCTGAGGAATAAGAATCCAAAACTATTTTGGGTACCAGCTATAGCTCCAATGACGACTGTAATAGTTGCTGGCATTTTCACCTACCTTGTCAAGGGCCAACATCATGGAATTCAAATTGTGGGCCATCTCGATAAAGGATTAAATCCCTTGTCCATCCAGTATTTGAACTTTAATAGTAAATATTTAGCGGCAGTGGTTCGAGCTGGCCTTATTACTGGCGTCTTGTCATTGGCGGAAGGAATAGCAATAGGAAGAAGCTTTGCTGTTACTGATAATACACCTCATGATGGGAACAAAGAGATGATAGCTTTTGGCCTTATGAACTTGTGCGGTTCTTTTACTTCATGTTACTTGACCAGTGGACCATTTTCCAAGACTGCAGTGAATTACAATGCAGGGTGTAAGACTGCCATGGCAAACGTGATACAAGCAATCGTAATGGCACTCACACTACAATTTTTGGCACCACTATTTGGCTACACCCCTCTTGTTGCTCTATCAGCTATTATTATATCTGCCATGCTGGGCCTGATTCATTATGAAGAAGTTATCCATCTCTTTAAAGTTGACAAGTTTGATTTCGTTATTTGCATGGCTGCATTCCTTGGAGTCGCCTTTATAAGCATGGATATTGGCCTCATGATTTCTGTTGGACTTAGTGTGCTTAGAGCACTGTTATACGTGGCTAGACCTGCGGCATGCAAGCTAGGAAAATTGCCTGATCATATGGGCTTATATAGAGATGTTGAGCAATATACTGCTTCAACATTACAAGGAATTCTAGTTATACAACTTGGTTCTCCCGTTTACTTTGCAAATTCTGTATACGTCAAAGAAAAGATTATGAGGTATATTCGGAGTGAGGAAAGCTCTAGTGGAGATGTGGTTGAGCATGTCATACTCGATTTGTCAGGAGTGACATCCATTGACACAACTGGTATTAAAGGATTGGATGAGACAAATAAAATATTGGGGAAGAATGGAATTAAGATGGCGATAGTAAACCCAAGACTGGAGGTGATGGAGAAGCTAATAGCATCCAAGTTTGTTGACAAAATTGGGAAAGATTCGTTCTATTTAACATTGGATGATGCAGTGATGGCATCTCAATATTCACTTCGTTTGTCAAAGACAAATAATACTCATGAAGAGATAGTGGTTCATGATCAAGATCATGCCTAA 1956 0.4187 MGSMDKSEVDDRYHGVNFTTQRGFRAKFKSGLKETFFPDDPFRQFKNEEKPLRRVIKGVQYFVPIFEWLPNYTWRLFCSDLIAGLTISSLAIPQGISYAKLANLPPLIGLYSSFVPPLVYAVFGSSRHMAVGTIAAASLLIGQTIATVADPEEEPTLFLHLIFTTTFITGIFQACLGVFRLGILVDFFSHSTINGFMGGTAIILILQQLKGIFGMKHFSTKTNVIAVVKAILANRHEIRWETTVLGVIFIAFLQFTRHLRNKNPKLFWVPAIAPMTTVIVAGIFTYLVKGQHHGIQIVGHLDKGLNPLSIQYLNFNSKYLAAVVRAGLITGVLSLAEGIAIGRSFAVTDNTPHDGNKEMIAFGLMNLCGSFTSCYLTSGPFSKTAVNYNAGCKTAMANVIQAIVMALTLQFLAPLFGYTPLVALSAIIISAMLGLIHYEEVIHLFKVDKFDFVICMAAFLGVAFISMDIGLMISVGLSVLRALLYVARPAACKLGKLPDHMGLYRDVEQYTASTLQGILVIQLGSPVYFANSVYVKEKIMRYIRSEESSSGDVVEHVILDLSGVTSIDTTGIKGLDETNKILGKNGIKMAIVNPRLEVMEKLIASKFVDKIGKDSFYLTLDDAVMASQYSLRLSKTNNTHEEIVVHDQDHA* 652
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr6g1100 651 Gene3D STAS domain 489 630 IPR036513 -
Apr6g1100 651 PANTHER SULFATE TRANSPORTER 10 637 IPR001902 GO:0015301|GO:0016020|GO:0055085
Apr6g1100 651 TIGRFAM sulP: sulfate permease 64 623 IPR001902 GO:0015301|GO:0016020|GO:0055085
Apr6g1100 651 ProSiteProfiles STAS domain profile. 508 627 IPR002645 -
Apr6g1100 651 Pfam STAS domain 510 623 IPR002645 -
Apr6g1100 651 ProSitePatterns SLC26A transporters signature. 106 127 IPR018045 GO:0008271|GO:0008272
Apr6g1100 651 PANTHER SULFATE TRANSPORTER 3.5-RELATED 10 637 IPR030316 GO:1902358
Apr6g1100 651 CDD STAS_SulP_like_sulfate_transporter 516 620 - -
Apr6g1100 651 Pfam Sulfate permease family 77 458 IPR011547 GO:0016021
Apr6g1100 651 SUPERFAMILY SpoIIaa-like 509 624 IPR036513 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr6g1100 Apr-Chr6 15690796 15695784 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr6g1100 3 635 Inorganic Solute Cotransporters AT5G19600 61.199 0.0 800
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr6g1100 K17471 - gmx:100789107 1007.28