Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr6g1099 ATGAGGAAGAAAGGCTATTCCTATTCCAACCTTCTTCTCCTCATTGCTTTGTTCATAGCCACACTCTCTCTCAGTGCCTCATCGCTTTCAATCTCACACAATGGAGCCCTCACAGACGCAGAAGCCTCGTACATCAAACAAAGACAACTTCTCTACTACAAGGACGAGTTCGGCGACAGAGGAGAGGAAGTAACCGTAGACCCTTCTCTCGTTTTCGAGAACAACCGCATCAGAAACGCTTACATAGCCTTGCAAGCGTGGAAGCAAGCCATTCTATCCGATCCCAAGAACCTCACCGGAGACTGGGTCGGTCCCAATGTCTGTAATTACACCGGCGTTTTCTGCGCTCCTGCGCCGGACAACCGCAAGATCCGCACCGTCGCCGGCATTGACCTCAACCACGGCGACATTGCCGGATACCTTCCGGAAGAACTCGGTCTGCTCGTCGATTTAGCGCTCTTCCACATCAACACCAACCGCTTTTGCGGCACAGTGCCTCACAAGTTTGACAAGCTCAAAATCCTATTTGAATTAGATCTCAGCAATAACCGCTTCGCCGGGAAGTTCCCCAACGTGGTGCTGCACTTGCCGAAACTCAAGTTTCTAGATCTGAGGTTTAACGAATTCGAAGGAACGGTGCCTAAAGAGCTCTTCGATAAAGACTTCGACGCGATCTTCATCAACGACAACCGCTTCGTCTTCGACTTGCCGGACAATTTTGGGAACTCGCCGGTGTCCGTGATTGTGCTGGCGAACAACCGTTTCCACGGGTGCGTGCCGGCGGGAATAGGCAACATGAAGAGGCTGAATGAGATTATTCTGATGAACAATAATTTCCGGTCATGTTTGCCGGCGGAAGTGGGGTTGTTGAAGAACTTGACAGTGTTCGACGTGAGCTTCAACCAGTTGTTGGGGCCATTGCCGGAGGCTATTGGAGGTGCGGTGAGTTTGGAGCAACTGAATGTGGCTCACAATATGCTCTCTGGGAAGATTCCTGAGAGCATTTGTAAGCTTCCAAATTTGCAGAACTTTACTTATTCTTATAACTTCTTCACCGGCGAGCCGCCCAAGTGTCTCGCCTTGCCGGCTTTTGATGACCGGAGAAACTGCTTGCCGGCGAGACCGTTCCAGCGTTCGGCTGCGCAATGTAAGCGGTTTTTGTCTCACCCTGTGGATTGCAACTCATTTAAGTGTAAGCCTTTTGTTCCTTCCTTGCCTCCTCCTCCACCACCGTCACCTGTTTATATTCCACATTCTCCCCCACCACCAGTTTACTCTCCGCCACCGCCTCCGCCTCCGCCAGTATACTCTCCACCACCGCCTCCGCCAGTGTATTCACCGCCACCTCCACCACCTGTGTACTCTCCACCTCCACCACCCCCTCTTCTATATAGTTCACCACCACCTCCACCTCCCACTCCTGTTTATTACTACAATTCACCGCCGCCGCCGCCACCTGCGCCTGTATATGAAGGGCCTTTGCCACCTGTAATCGGAGTGTCATATGCATCTCCTCCTCCACCACCCTTTTATTGA 1536 0.5189 MRKKGYSYSNLLLLIALFIATLSLSASSLSISHNGALTDAEASYIKQRQLLYYKDEFGDRGEEVTVDPSLVFENNRIRNAYIALQAWKQAILSDPKNLTGDWVGPNVCNYTGVFCAPAPDNRKIRTVAGIDLNHGDIAGYLPEELGLLVDLALFHINTNRFCGTVPHKFDKLKILFELDLSNNRFAGKFPNVVLHLPKLKFLDLRFNEFEGTVPKELFDKDFDAIFINDNRFVFDLPDNFGNSPVSVIVLANNRFHGCVPAGIGNMKRLNEIILMNNNFRSCLPAEVGLLKNLTVFDVSFNQLLGPLPEAIGGAVSLEQLNVAHNMLSGKIPESICKLPNLQNFTYSYNFFTGEPPKCLALPAFDDRRNCLPARPFQRSAAQCKRFLSHPVDCNSFKCKPFVPSLPPPPPPSPVYIPHSPPPPVYSPPPPPPPPVYSPPPPPPVYSPPPPPPVYSPPPPPPLLYSSPPPPPPTPVYYYNSPPPPPPAPVYEGPLPPVIGVSYASPPPPPFY* 512
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr6g1099 511 Gene3D Ribonuclease Inhibitor 244 373 IPR032675 -
Apr6g1099 511 SUPERFAMILY L domain-like 81 362 - -
Apr6g1099 511 Pfam Leucine rich repeat 154 208 IPR001611 GO:0005515
Apr6g1099 511 PANTHER LEUCINE-RICH REPEAT EXTENSIN-LIKE PROTEIN 3-RELATED 14 509 - -
Apr6g1099 511 Gene3D Ribonuclease Inhibitor 81 243 IPR032675 -
Apr6g1099 511 PANTHER LEUCINE-RICH REPEAT EXTENSIN-LIKE PROTEIN 4 14 509 - -
Apr6g1099 511 PRINTS Proline rich extensin signature 410 422 - -
Apr6g1099 511 PRINTS Proline rich extensin signature 422 443 - -
Apr6g1099 511 PRINTS Proline rich extensin signature 445 461 - -
Apr6g1099 511 Pfam Leucine rich repeat N-terminal domain 83 115 IPR013210 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr6g1099 Apr-Chr6 15669902 15673452 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr6g1099 26 398 Leucine-rich Repeat extension Gene Families AT3G24480 76.738 0.0 609
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr6g1099 - - gmx:106799218 702.205