Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr6g1083 ATGTTTCCTTCAACATTTGCAATCTCATGGATCGTTTTGACCGTGATATTCATATTATCAGCAACGCTATTGCGAAGACGAAGGGAACATCACAGGAAACAACCACCAGGTCCACCGGCTCTATGGGTTTTAGGTCACCTCCACATGTTGGGTCACCTTCCCCATCGTACTCTTCGAACTTGGTCCCAAAAATATGGTCCCATAATGTCTCTTCGTTTGGGACAGGTTCCTACTATTGTGGTCTCGTCCCCAGAAGCTGCTGAACAATTCCTCAAGACCCACGAAACAGTTTTTGCGAACAGACCCAAAATTGAAGCCTCCAAGTACTTCTCTTACGGCTACAAGGGTATGGTGTTTGCTGAGTATGGGACATATTGGCGCCAAATGAGGAAAGTGTGCACTTTGCAGCTTCTGAGTGCGTCTAAGGTTGAGTCCTTTGGGGCTTTGAGGAAGATGGAGGTGGAAGCAGTGGTCAAATCGTTGCAGAAAGGGGCAATGGTGGGTGAGGTGGTGAACCTCAGTGAAGTGGTGACGGGGCTATTGGAGGATGTTGTGTATAAGATGGTGTTGGGGTGTAGTAAAGATGACAAGTTTGATTTGAAGGGGCTTCTTCAAGAGGCTACGCTCCTTGCTGGGAAGTTTAATCTTTCAGATTTTGTGCCTTGGCTTCGGGTGTTCGATATACAGGGACTAAGACGAGGCTTCAAGAAAACCGGTAAAGCACTTGACGAAGTGTTGGAGAAAATAATCGAAGAACATGAACAAGCTTCCATTGAACAAAATGGCAGCCATAAGGATTTTGTAGACATATTACTCTCAATGATGCACCAACCCATTGACCCGTATGATGAACATAGCCATGCCATTGATCGAACAAACATCAAGGCCATTGTCTTAGACATGATTGCTGCATCATTTGAAACTTCTTCAACTGTTATTTTGTGGGCATTATCTGAGCTATTAAGGCATCCAAGGGTGATGAAAAAGCTCCAACATGAGCTAGCCACTGTGGTTGGAATGAACAAATTGGTGGAGGAGAGTGATATAGTAAAGTTGAGTTACTTGGATATGGTGATTAAGGAGACCCTGAGATTGCATCCTGCTGGATCATTCATTACCCGATTCTCCAGAGAGGATACTATGATTAATGGTTATCACATAAAGAAAAATTCAGAAATCCTAGTAAATATATGGGCCATTGGGAGAGATCCTAAGGTTTGGTCTGATAATGCTGATTTGATACCATTTGGTTCTGGTCGTAGAGGGTGTCCTGGGATAAACTTGGGTCTTGCTACTGTTAAACTTGTTGTATTTCAGCTAGTGCATTGCTTTAATTGGAAGCTTCCATGGGGCATGACTCCTGATGACTTGGACATGAAAGAACAATTTGGGCTAACAAGCCCAAGAACCACACCCTTACTTGCTGTGCCAACATATCAGCTTCAAATCGCACCAGGTCCTAAGGCTTTGCCAATCATTGGTAACCTACACATGCTAGGGAAACTCCCACACCGCAGCCTTCAATCCCTTGCAAAAAAATATGGACCTATAATGTCCTTAAAGCTAGGACAGGTTTCAGCCATTGTGGTTTCTTCTCCTGAAACAGCTGAACTATTTCTCAAGACCCATGACACACTTTTTGCTAGCAGGCCGAAACTTCAAGCCTCAGAATCTCTTTCTCATGGTAGCAAGGGCCTTGCTTTTTCTGAATATGGTGCCTACTGGCGCAACATGAGAAAATTGTGCACTCTACAACTTTTGAGTGCATCAAAAGTTGAGATGTTTGCTCCTTTGAGGAGAGAGGAATTAGGAGGATTGGTGAAGGCACTAAAAAATGCATCAGCATCGTGTGAAGTTGTGGACCTTAGTGAGTTGCTGGGAGAACTCATTGAGAACATTGTGTTTAAGATGATATTGGGACGCACTAAGGATGATAGATTCGAGTTAAAGGGACTTGTTCATGAGGTAATGAACTTGGTTGGTGCTTTCAATATTGCAGATTACATGCCTTGGCTAGGCTTGTTTGATCCTCAGGGACTAACAAGACGATTAAAGAAAGCAAGTAAGGCGTTTGATCAAGTCTTGGAGCATATTATCGAAGACCATGAACATCCATCAAATAATGAACAGAAAGGCTCTGGCAAGGACTTTGTGGACATTTTGTTATCACATTTGCACCAACCCATTGATCTTCAAGACGAACAGAAGCATGTCATTGATAGAACTAATATCAAGGCTATTATATTAGACATAATTACAGCAGCATTGGACACCTCTACTGTAACTGTTGATTGGGCTATGTCAGAACTATTGAGGCACCCAAGTGTGATGAAGAGACTTCAAGATGAGCTAGAAAATGTTGTGGGATTGAATAAACAGGTGGAGGAGAATGACTTAGAAAAACTGCCCTACTTGAATATGGTAGTGAAGGAAACATTGCGATTATATCCTGTTGCACCTTTGTTATTGCCTCGTGAGTCTAGAGAGGATGTTACTATTGAAAGTTATTACATAAATAAAAAATCAAGGATCATAATAAATGCATGGGCAATAGGGAGAGATCCTAAAGTTTGGTCACATACTGCTGAGATGTTTGATCCAGAAAGATTTGCTAATAGCAATGTGGACATTCGTGGAAATGACTTTCGAGTTTTACCATTTGGTTCAGGTCGTAGAAGTTGCCCTGGGATTCACTTGGGTCTAACTACTGTTAAGCTTGTTCTAGCTCAATTGGTTCATTGCTTTAATTGGGTCCTTCCACTGGGTATTTCTCCTGATGAGTTAGACATGGATGAGAACTTTGGCCTCACAATGCCAAGAAATAAGCACTTACTGACTATGCCAATTTATCGGCTAGTTGATTGA 2865 0.4234 MFPSTFAISWIVLTVIFILSATLLRRRREHHRKQPPGPPALWVLGHLHMLGHLPHRTLRTWSQKYGPIMSLRLGQVPTIVVSSPEAAEQFLKTHETVFANRPKIEASKYFSYGYKGMVFAEYGTYWRQMRKVCTLQLLSASKVESFGALRKMEVEAVVKSLQKGAMVGEVVNLSEVVTGLLEDVVYKMVLGCSKDDKFDLKGLLQEATLLAGKFNLSDFVPWLRVFDIQGLRRGFKKTGKALDEVLEKIIEEHEQASIEQNGSHKDFVDILLSMMHQPIDPYDEHSHAIDRTNIKAIVLDMIAASFETSSTVILWALSELLRHPRVMKKLQHELATVVGMNKLVEESDIVKLSYLDMVIKETLRLHPAGSFITRFSREDTMINGYHIKKNSEILVNIWAIGRDPKVWSDNADLIPFGSGRRGCPGINLGLATVKLVVFQLVHCFNWKLPWGMTPDDLDMKEQFGLTSPRTTPLLAVPTYQLQIAPGPKALPIIGNLHMLGKLPHRSLQSLAKKYGPIMSLKLGQVSAIVVSSPETAELFLKTHDTLFASRPKLQASESLSHGSKGLAFSEYGAYWRNMRKLCTLQLLSASKVEMFAPLRREELGGLVKALKNASASCEVVDLSELLGELIENIVFKMILGRTKDDRFELKGLVHEVMNLVGAFNIADYMPWLGLFDPQGLTRRLKKASKAFDQVLEHIIEDHEHPSNNEQKGSGKDFVDILLSHLHQPIDLQDEQKHVIDRTNIKAIILDIITAALDTSTVTVDWAMSELLRHPSVMKRLQDELENVVGLNKQVEENDLEKLPYLNMVVKETLRLYPVAPLLLPRESREDVTIESYYINKKSRIIINAWAIGRDPKVWSHTAEMFDPERFANSNVDIRGNDFRVLPFGSGRRSCPGIHLGLTTVKLVLAQLVHCFNWVLPLGISPDELDMDENFGLTMPRNKHLLTMPIYRLVD* 955
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr6g1083 954 PRINTS E-class P450 group I signature 62 81 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr6g1083 954 PRINTS E-class P450 group I signature 86 107 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr6g1083 954 PRINTS E-class P450 group I signature 293 310 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr6g1083 954 PRINTS E-class P450 group I signature 313 339 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr6g1083 954 PRINTS E-class P450 group I signature 806 824 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr6g1083 954 PRINTS E-class P450 group I signature 884 894 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr6g1083 954 PRINTS E-class P450 group I signature 894 917 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr6g1083 954 Coils Coil 777 797 - -
Apr6g1083 954 PANTHER FLAVONOID 3'-MONOOXYGENASE-RELATED 483 950 - -
Apr6g1083 954 PANTHER FLAVONOID 3'-MONOOXYGENASE-RELATED 9 481 - -
Apr6g1083 954 Pfam Cytochrome P450 485 944 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr6g1083 954 Pfam Cytochrome P450 35 469 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr6g1083 954 SUPERFAMILY Cytochrome P450 485 946 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr6g1083 954 PANTHER CYTOCHROME P450 FAMILY PROTEIN 9 481 - -
Apr6g1083 954 PANTHER CYTOCHROME P450 FAMILY PROTEIN 483 950 - -
Apr6g1083 954 SUPERFAMILY Cytochrome P450 35 476 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr6g1083 954 PRINTS P450 superfamily signature 304 321 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr6g1083 954 PRINTS P450 superfamily signature 807 818 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr6g1083 954 PRINTS P450 superfamily signature 885 894 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr6g1083 954 Gene3D Cytochrome P450 477 947 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr6g1083 954 Gene3D Cytochrome P450 20 473 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr6g1083 954 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 887 896 IPR017972 GO:0005506|GO:0016705
Apr6g1083 954 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 416 425 IPR017972 GO:0005506|GO:0016705
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr6g1083 Apr-Chr6 15502011 15512728 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr6g1083 485 953 Cytochrome P450 AT5G57260 39.463 4.14e-120 374
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr6g1083 - - aprc:113867069 1887.46
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr6g1083 6 15502011 15512728 Apr6g1083 6 15502011 15512728 ECH