Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr6g1082 ATGTCACTTCAAACATTAGCTATGCCTACAATCGTAATCCTTGGGATATTCATATTCACTCTATATGTTGCTATATTGCATCCAAAACAACATCAAAATAATGGGAAAAATGCACCAGGTCCTATGGCCTTGCCAATTATTGGTAACCTACACATGTTAGGGAAACTCCCACACCGCAGCCTTCAATCCTTAGCCAAAAAATATGGACCCATAATGTCCTTAAAGCTAGGACAGGTTCCTGCAATTGTGATTTCTTCCCCTGAAACAGCTGAACTATTCCTCAAGACCCATGACACTCTCTTTGCAAGCAGGCCTAAAATTGAAGCTTCGAAATTTATTCTTAAGAACAAGGGCCTAGTGTTTTCTGAGTATGGTGCCTACTGGCGCAACATGAGAAAATTGTGCACTCTACAACTTTTGAGTGCATCAAAAGTTGAGATGTTTGGTCCTTTGAGGAGAGAAGAGGTGGGAATATCGGTGAAGAGAATAAAAAATGCAGCAGCGTTGTGTGAAGTTCTGGACCTTAGTGCGTTGGTGGGAGAGCTTATGGAGAACATTGTATATAAAATGGTTTTTGGGCGCACTAAAGATGATAGATTCGACTTAAAGGGACTTGTCGAAGAGATATTGAGCTTGGTCGGAGCTTTCAACGTTGCAGACTACATCCCTTGGCTTGGTGTGTTTGATCCTCAGGGACTTACAAGACGATTAAAGAGAGCAAGCAAGGCATTTGACGAAGTCTTGGAGCAAATAATTGGAGACCATGAGCATCCACCTGATGATGAACAAAAAGGGCCACGCAAGAAGGACTTTGTGGACATAATGCTATCACTTATGCACCAACCCATGGATCTTAATGATGGACAGAATTACGTCATTGATAGAACTAATATCAAAGCTATTATAACAGAAATGATTGGAGCATCATTGGACACATCTGTTACAACAGTTGAGTGGGCTATGTCAGAACTCTTGAGGAATCCAAGTGTGATGAAGAGACTTCAAGATGAACTAGAAAATGTAGTGGGAATGAACAGACATGTGGAAGAGCATGACTTGGAAAATTTGCCCTATTTAAATATGGTAGTGAAGGAGACGTTGCGATTATATCCTGTTGCACCTTTGCTAGTGCCACGTGAGTCTAGAGAAGATGTTACCATTGAAGGTTATGACATAAAGAAAAAGTCAAGGATCATAATAAATGTATGGGCAATAGGAAGAGATCCTAAAGTTTGGTCACATAACTTCCAACTTGTACCATTTGGTTCAGGTCGCAGAAGGTGTCCTGGGATGCAATGGGGTCTAACTACTGTTAGACTAGTTCTAGCTCAATTAGTGCATTGCTTCGATTGGGAGCTTCCATTGGGCATGTCTCCACATGACTTAGACATGACTGAGAAATTTGGTCTTGCAATTCCAAGAAATAAGCAATTGCGAGCAATGCCAACTTATCGCATAAAAAATCCACCAGGTCCTAAGGCCTTGCCAATTATTGGTAACCTACACATGTTAGGGAAACTACCACATCGCACCCTTCAAGCCCTTGCCACAAAATATGGACCCATCATGTCCTTAAAATTAGGACAAGTACCAACCGTTGTGATTTCCTCTCCTGAAACAGCTGAGCTATTCCTCAAGACCCATGACACTGTTTTTGCTAGTAGGCCTAAAACTCAAGCCTCAGAATACATGTCTTATGGCTCTAAAGGGGTAGTGTTTTCTGAGTATGGTGCATATTGGCGCAACCTGAGAAAGGTGTGCACCACACAACTTTTAAGTGCATCAAAAGTTGAGATGTTTGCTCCTTTGAGGAGGGAAGAGTTAGGACTACTTGTGAAGTCACTTGAAAAAGCAGCATCCTCACGTGAGGTTGTAAACATCAGTGAGCAAGTTGGGGAGGTTATATCAAATATTGTCTATAAGATGATACTTGGGCGCAGTAAGGATGATAGATTCGACCTTAAGGGGCTTGTTCATGACGCTTTGCACTTGAGTGGAGTTTTCAACGTGGCAGATTATGTACCTTGGGCAGGTATCTTTGATCTTCAGGGACTAAAAAGAAAATTCAAGAAAACAAGTGAGGCATTCGATCAAGTGTTTGAGCAGATCATCAAAGATCATGAGGAAGCTTCTAATAGCATGAAAAATAATGTGCATTACAAGGACTTTGTGGACATACTGCTGTCACTTATGCACCAAAACATGGATCAATATGAGCAGAAACATGTGATTGACAGAACTAATATCAAGGCTATTATATTGGATATGATTGGAGGAGCATTTGACACATCTACCACTGCAATTGAATGGGCTATGTCAGAACTCTTAAGGCACGAAAGGGTCATGAAGAAGCTTCAAGATGAGTTAAATAATGTGGTAGGGATAAAAAGGCAAGTAGAGGAGTCAGACTTGGCAAAATTGCCTTATTTGAATATGGTAGTGAAAGAGACATTAAGGTTGTATCCTGTTGGACCTTTGCTAGTGCCTCGTGAGTCCCTAGAAGATATCACTATTAATGGTTATCACATAAAGAAAAAGACAAGAATTTTGATCAATGCATGGGCAATAGGACGAGATCCTAAAGTATGGTCAAATAATGCCGAAATGTTTTATCCAGAGAGATTTGTTAATAGCAATATAGACATTAGAGGACAAGACTTTAAACTCATACCATTTGGTTCAGGTCGTAGAGGATGTCCTGGGATACAATTGGGTTTAACTACTGTTGGTCTTGTTCTAGCTCAATTAGTGCATTGCTTTAATTGGGAACTTCCATTGAACATGTCTCCAGAGGACTTAGACATGACTGAGGAATTTGGCCTTTCAATTCCAAGAAGTAAGCACTTGTTGGCTATACCAACTTGTCGCCTATTCAATAAAGCTTGA 2886 0.4061 MSLQTLAMPTIVILGIFIFTLYVAILHPKQHQNNGKNAPGPMALPIIGNLHMLGKLPHRSLQSLAKKYGPIMSLKLGQVPAIVISSPETAELFLKTHDTLFASRPKIEASKFILKNKGLVFSEYGAYWRNMRKLCTLQLLSASKVEMFGPLRREEVGISVKRIKNAAALCEVLDLSALVGELMENIVYKMVFGRTKDDRFDLKGLVEEILSLVGAFNVADYIPWLGVFDPQGLTRRLKRASKAFDEVLEQIIGDHEHPPDDEQKGPRKKDFVDIMLSLMHQPMDLNDGQNYVIDRTNIKAIITEMIGASLDTSVTTVEWAMSELLRNPSVMKRLQDELENVVGMNRHVEEHDLENLPYLNMVVKETLRLYPVAPLLVPRESREDVTIEGYDIKKKSRIIINVWAIGRDPKVWSHNFQLVPFGSGRRRCPGMQWGLTTVRLVLAQLVHCFDWELPLGMSPHDLDMTEKFGLAIPRNKQLRAMPTYRIKNPPGPKALPIIGNLHMLGKLPHRTLQALATKYGPIMSLKLGQVPTVVISSPETAELFLKTHDTVFASRPKTQASEYMSYGSKGVVFSEYGAYWRNLRKVCTTQLLSASKVEMFAPLRREELGLLVKSLEKAASSREVVNISEQVGEVISNIVYKMILGRSKDDRFDLKGLVHDALHLSGVFNVADYVPWAGIFDLQGLKRKFKKTSEAFDQVFEQIIKDHEEASNSMKNNVHYKDFVDILLSLMHQNMDQYEQKHVIDRTNIKAIILDMIGGAFDTSTTAIEWAMSELLRHERVMKKLQDELNNVVGIKRQVEESDLAKLPYLNMVVKETLRLYPVGPLLVPRESLEDITINGYHIKKKTRILINAWAIGRDPKVWSNNAEMFYPERFVNSNIDIRGQDFKLIPFGSGRRGCPGIQLGLTTVGLVLAQLVHCFNWELPLNMSPEDLDMTEEFGLSIPRSKHLLAIPTCRLFNKA* 962
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr6g1082 961 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 421 430 IPR017972 GO:0005506|GO:0016705
Apr6g1082 961 PANTHER CYTOCHROME P450 93A3-LIKE 487 958 - -
Apr6g1082 961 PANTHER CYTOCHROME P450 93A3-LIKE 11 487 - -
Apr6g1082 961 Coils Coil 331 351 - -
Apr6g1082 961 PRINTS E-class P450 group I signature 65 84 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr6g1082 961 PRINTS E-class P450 group I signature 89 110 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr6g1082 961 PRINTS E-class P450 group I signature 182 200 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr6g1082 961 PRINTS E-class P450 group I signature 297 314 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr6g1082 961 PRINTS E-class P450 group I signature 317 343 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr6g1082 961 PRINTS E-class P450 group I signature 811 829 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr6g1082 961 PRINTS E-class P450 group I signature 889 899 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr6g1082 961 PRINTS E-class P450 group I signature 899 922 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr6g1082 961 PRINTS P450 superfamily signature 308 325 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr6g1082 961 PRINTS P450 superfamily signature 361 372 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr6g1082 961 PRINTS P450 superfamily signature 419 428 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr6g1082 961 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 892 901 IPR017972 GO:0005506|GO:0016705
Apr6g1082 961 PANTHER CYTOCHROME P450 FAMILY PROTEIN 487 958 - -
Apr6g1082 961 PANTHER CYTOCHROME P450 FAMILY PROTEIN 11 487 - -
Apr6g1082 961 Pfam Cytochrome P450 489 947 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr6g1082 961 Pfam Cytochrome P450 39 413 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr6g1082 961 Pfam Cytochrome P450 414 475 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr6g1082 961 Gene3D Cytochrome P450 27 483 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr6g1082 961 Gene3D Cytochrome P450 484 952 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr6g1082 961 SUPERFAMILY Cytochrome P450 489 954 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr6g1082 961 SUPERFAMILY Cytochrome P450 37 485 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr6g1082 961 Coils Coil 768 802 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr6g1082 Apr-Chr6 15479115 15498609 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr6g1082 487 953 Cytochrome P450 AT3G26330 42.316 1.81e-125 388
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr6g1082 - - gmx:100782715 1491.48
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr6g1082 6 15479115 15498609 Apr6g1082 6 15479115 15498609 ECH