Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr6g1068 ATGCGTTTGAGCTGCAATGGGTGCCGTGTTCTCCGAAGAGGTTGCAACCCAAATTGCCCCATTGGGTCCTCTCTCCATTGGATCAAATCACCAAACTCTCAATCCAACGCCACCCTCTTCCTTGCTAAGTTCTATGGCCGCCAAGCCCTCATCAACCTCCTCACCACTGCTCCTTCACAACTCCAACCAGATGTTTTCAAATCTTTGCTCTACGAAGCTTGTGGTCGAATCGTGAACCCAATTTTTGGCTCGGCTGGGTTGCTCTTGGCTGGGAGTTGGCACCTCTGTGAAGCTGCAGCGGAAGCCGTCCTTAATGGCGCGCCGATTCAACAAGATCATTTGGATGGCTCCGTAAGCCTTCAGCCACAGGATTGCGATATTCGTCACGCGGTGAAGAGTGGGAAGTCACGCGGCTCTGATGGACACCACAAGGTGAAGTCAGGGACAAGCCAGTTCAAGCGCCGAGCCAAGAAGCTGAAAGCAGACTCAAGTGTGGCTGAGTTGGTGGGAGTGGCTGATTCTGGAAGTGAGTTAGGAGGTTCAGTGAGTCGTGATTCAGGGTCTGGGGTGACTCGGGTGAGCGAACACAAAAGCATTGGTGGAGAAGGTGACAGTAACTTTGGTGAGATTGTGGAGCCAACACCAGCTGATGATGGAGAATTGGAGCTTGAGTTGACTTTGGGGTGA 687 0.524 MRLSCNGCRVLRRGCNPNCPIGSSLHWIKSPNSQSNATLFLAKFYGRQALINLLTTAPSQLQPDVFKSLLYEACGRIVNPIFGSAGLLLAGSWHLCEAAAEAVLNGAPIQQDHLDGSVSLQPQDCDIRHAVKSGKSRGSDGHHKVKSGTSQFKRRAKKLKADSSVAELVGVADSGSELGGSVSRDSGSGVTRVSEHKSIGGEGDSNFGEIVEPTPADDGELELELTLG* 229
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr6g1068 228 ProSiteProfiles LOB domain profile. 3 109 IPR004883 -
Apr6g1068 228 MobiDBLite consensus disorder prediction 179 193 - -
Apr6g1068 228 MobiDBLite consensus disorder prediction 132 147 - -
Apr6g1068 228 PANTHER LOB DOMAIN-CONTAINING PROTEIN 38 1 171 - -
Apr6g1068 228 MobiDBLite consensus disorder prediction 132 153 - -
Apr6g1068 228 MobiDBLite consensus disorder prediction 176 228 - -
Apr6g1068 228 Pfam Lateral organ boundaries (LOB) domain 4 103 IPR004883 -
Apr6g1068 228 PANTHER LOB DOMAIN-CONTAINING PROTEIN 40 1 171 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr6g1068 Apr-Chr6 15365017 15366297 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr6g1068 1 227 AS2 family AT3G02550 43.460 5.83e-58 182
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Apr6g1068 LOB 1.5e-21 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr6g1068 - - vun:114181255 279.256
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr6g1068 6 15365017 15366297 Apr6g1068 6 15365017 15366297 ECH