Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr6g1067 ATGAATCAAGTAGGTCATAAGTTGCCTGAGGTGATTCAACTAAAGCATGGAAACTACTCAGATCTTCCTCATGCAAAACTTTCAGAACTGATAAAATCAACCAATGTGGATAATGCTCCTACACAATCACTTTTAAGTGTTGTAAATGGTATCCTGGAAGAAAGTGTTGAAAGAAGAAATGGCGAAATACCTCATCGTGTGGCTTGCTTATTGAGAAAAGTTGTTCAAGAGATTGAGAGGCGTATATCAACTCAAGCTGGTCATTTACGCACTCAAAACAATCTTTTCAAGGCTCGTGAAGAAAAATATCAATCAAGAATCAAAGTGCTTGAGGCTCTTGCATCTGGAACAAGGGAAAAGAGTGAGGTATCACAAGTAACAGATAAATCAGTACAAACTGAGAAGACTAAAGAGGAAGAAAAGAGGGAATATGACAAAGAGGTTATTAGATTGATTAAAGAGATGGAGGATAAAAATATGGAAATTTCAAGATTGAAACAAGAGCTAGAAACTATGAAAAACACATATGAAGTTCAATGCTCAAAGTTGGAATCAGAAGCTAAGGATGCTAAAGATGCTAAAGGAGAACTGAAACAGAAATCAGAAGAATATGAAAATATGTTGGAAAAATTAAGAAATAAGGTTAAAGACAATGAGGCCCTTTCTGAGTCAAGATATCAAAAGTGGAAAATGAAAGAGAACCAAATCCGGAATGCTGTGAATTTTCAGTGTAGTTCCCTACAGGTAAACTTATACATGGGTGAATCTCCTGAATTTTCATGCATCCAGAAATTGAAGTTGTCATGGGAATCCATTAAGCAAGAGGCTATGAAAGAGCAAATGGTTTATGTAGAGCAATGTAATCGATTAGGTGTAAATCTTAAACCACTAGTAGATGTAGCTGAGAATTATCAAACAGTTCTTGCAGAAAATCGAAAACTTTTCAATGAAGTTCAAGAATTAAAAGGTGGAAATATAAGAGTATATTGTCGAATCAGACCATTTCTTCCTGGACTTAAGGAAAAACAATCTATTGTGGAACACATTGGTGACGCTGAATTGGTTGTGGCAAATCCCTCCAAACAAGGAAAAGAAGCACTTAAAACATTTAAGTTTAACAAGATCTTTGATCCAGCCTCAACTCAAGGTTTATTTCTATATACTCTCCATTTTACTAATTTGAATGACGCAGCTGAAGTGTATGCTGACATACAAGCCTTTATACGATCAGTACTTGATGGGTATAATGTATGTATATTTGCTTATGGCCAAACGGGTTCAGGGAAAACTTACACAATGAGTGGTCCAAATAATGCAACAGGCGAGAGTGTTGGTGTTAACTATAGAGCTCTTAATGACCTCTTCAGCATATCCACAAGTAGAAAAAGCACCATAGTCTATGACATTGGGGTCCAAATAGTTGAGATTTATAATGAACAAGTGCGAGATTTTTTTATATTCGTGTATTTCCTTGATTTGCACACACTTGGGATATTGAGTCACTCTCAACCAAATGGTTTAGCAGTACCTGATGCTAGCATGATGCCAGTTAAATCAACCTCAGATGTTATGAAGCTAATGGACATCGGCCTAAAAAATAGAGCTAAGGGTTCCACTGCTATGAATGAAAGAAGTAGCCGTTCTCACAGTGTTGTTTCAATTCACGTTCGTGGGTTAGATAAGAAGTCTGGTTCTACTCTTCAAGGTAATCTTCATTTGGTAGACTTGGCAGGAAGTGAAAGGGTTGATCGTTCTGAAGTAACTGGAGATAGGCTTAAGGAAGCACAACATATTAACAAATCACTATCTGCCCTTGGAGATGTCATTTTTGCACTTGCTCAAAAGAGTGCTCATGTACCATACAGAAACAGCAAGCTTACTCAACTTCTGCAATCATCTCTTGGTGGTCATGCAAAGACACTCATGTTGGTCCAAATTAATTCAGACCAGAAATCTTATTCTGAATCTCTTAGTACTTTGAAGTTTGCTGAGAGGGTTTCTGGAGTTGAATTAGGAGCTGCAAGAAGTACCAAAGATGGTAGAGATGTCAGAGAATTAATGGAGCAGGTGTCTTCTCTCAAGGATACCATTTTGGTTAAAGATGAAGAGATTGAGCGGCTACAATTACTTAAGGATCTGAAAAATGTTTATCCTAGTGGCAATTCTGAGAAGCCTGAAAATGCCTCTGAATGA 2193 0.3712 MNQVGHKLPEVIQLKHGNYSDLPHAKLSELIKSTNVDNAPTQSLLSVVNGILEESVERRNGEIPHRVACLLRKVVQEIERRISTQAGHLRTQNNLFKAREEKYQSRIKVLEALASGTREKSEVSQVTDKSVQTEKTKEEEKREYDKEVIRLIKEMEDKNMEISRLKQELETMKNTYEVQCSKLESEAKDAKDAKGELKQKSEEYENMLEKLRNKVKDNEALSESRYQKWKMKENQIRNAVNFQCSSLQVNLYMGESPEFSCIQKLKLSWESIKQEAMKEQMVYVEQCNRLGVNLKPLVDVAENYQTVLAENRKLFNEVQELKGGNIRVYCRIRPFLPGLKEKQSIVEHIGDAELVVANPSKQGKEALKTFKFNKIFDPASTQGLFLYTLHFTNLNDAAEVYADIQAFIRSVLDGYNVCIFAYGQTGSGKTYTMSGPNNATGESVGVNYRALNDLFSISTSRKSTIVYDIGVQIVEIYNEQVRDFFIFVYFLDLHTLGILSHSQPNGLAVPDASMMPVKSTSDVMKLMDIGLKNRAKGSTAMNERSSRSHSVVSIHVRGLDKKSGSTLQGNLHLVDLAGSERVDRSEVTGDRLKEAQHINKSLSALGDVIFALAQKSAHVPYRNSKLTQLLQSSLGGHAKTLMLVQINSDQKSYSESLSTLKFAERVSGVELGAARSTKDGRDVRELMEQVSSLKDTILVKDEEIERLQLLKDLKNVYPSGNSEKPENASE* 731
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr6g1067 730 MobiDBLite consensus disorder prediction 118 140 - -
Apr6g1067 730 PRINTS Kinesin heavy chain signature 414 435 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Apr6g1067 730 PRINTS Kinesin heavy chain signature 539 556 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Apr6g1067 730 PRINTS Kinesin heavy chain signature 570 588 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Apr6g1067 730 PRINTS Kinesin heavy chain signature 619 640 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Apr6g1067 730 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 325 707 IPR027417 -
Apr6g1067 730 Gene3D Kinesin motor domain 266 671 IPR036961 -
Apr6g1067 730 PANTHER KINESIN MOTOR CATALYTIC DOMAIN PROTEIN 155 711 - -
Apr6g1067 730 PANTHER KINESIN MOTOR CATALYTIC DOMAIN PROTEIN 2 145 - -
Apr6g1067 730 SMART kinesin_4 323 677 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Apr6g1067 730 PANTHER KINESIN-LIKE PROTEIN KLP-3 155 711 - -
Apr6g1067 730 PANTHER KINESIN-LIKE PROTEIN KLP-3 2 145 - -
Apr6g1067 730 ProSiteProfiles Kinesin motor domain profile. 325 669 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Apr6g1067 730 Pfam Kinesin motor domain 331 667 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Apr6g1067 730 Coils Coil 134 221 - -
Apr6g1067 730 Gene3D - 144 184 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr6g1067 Apr-Chr6 15353944 15359658 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr6g1067 312 669 Calmodulin-binding Proteins AT5G65930 35.890 1.76e-60 219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr6g1067 K10406 - gmx:100779403 874.389
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr6g1067 6 15353944 15359658 Apr6g1067 6 15353944 15359658 ECH
Apr2g1450 2 20570610 20578564 Apr6g1067 6 15353944 15359658 PCT