Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr6g1056 ATGTACACATCAAGGAAGAAGATCCACAAAGATAAGGATGCTGAGCCGACTGAATTTGAGGAATCAGTTGGACAGGCATTGTTTGATCTAGAAAATACCAACAATGAGCTGAAAAGTGATCTGAAAGATTTATATATAAATTCAGCAGTCCAAATTGATGTTTCTGGGAACCGCAAGGCCGTAGTTATCCATATCCCCTACAGATTAAGGAAAGGGTTCCGAAAGATTCATGTCAGGCTTGTCAGAGAACTTGAGAAAAAATTTAGTGGAAAGGATGTAATCCTGGTTGCCACCCGGAGGATATTAAGGCCACCAAAGAAAGGTTCTGCTGTGCAGCGTCCCCGCAGCCGTACACTCACTACTGTGCATGAGGCAATGCTGGAGGATATTGTATTGCCTGCTGAGATTGTTGGAAAGCGTGTTAGGTATAGAATTGATGGTTCCAAGATTATGAAGGTGTTTTTGGACCCCAAGGAGAGAAACAACACTGAGTACAAGTTGGAGACTTTTGCTGCAGTGTACAGGAAATTTTCAGGCAAAGATGTTGTGTTTGAGTATCCTAGTACTGAGGCTTAG 576 0.4253 MYTSRKKIHKDKDAEPTEFEESVGQALFDLENTNNELKSDLKDLYINSAVQIDVSGNRKAVVIHIPYRLRKGFRKIHVRLVRELEKKFSGKDVILVATRRILRPPKKGSAVQRPRSRTLTTVHEAMLEDIVLPAEIVGKRVRYRIDGSKIMKVFLDPKERNNTEYKLETFAAVYRKFSGKDVVFEYPSTEA* 192
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr6g1056 191 PANTHER 40S RIBOSOMAL PROTEIN S7 2 191 IPR000554 GO:0003735|GO:0005840|GO:0006412
Apr6g1056 191 ProSitePatterns Ribosomal protein S7e signature. 79 92 IPR000554 GO:0003735|GO:0005840|GO:0006412
Apr6g1056 191 PANTHER 40S RIBOSOMAL PROTEIN S7 2 191 - -
Apr6g1056 191 Coils Coil 27 47 - -
Apr6g1056 191 Pfam Ribosomal protein S7e 7 186 IPR000554 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr6g1056 Apr-Chr6 15247118 15250733 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr6g1056 1 191 Cytoplasmic Ribosomal Protein Gene Family AT3G02560 79.058 3.17e-113 318
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr6g1056 K02993 - gmx:100499757 367.081
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr6g1056 6 15247118 15250733 Apr2g1460 2 20657856 20660056 ECH
Apr6g1056 6 15247118 15250733 Apr6g1056 6 15247118 15250733 ECH