Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr6g1047 ATGTATCTATCTGCTAACAGATACAAGTCATCAGCATGGCAAGGAAATTTTGGGTTGACTACAAAGAGTAACCAACATATTGAAGCATTCCTTAAAAATCACGGTGCTCTAACTCTAAAAAGATATAAATTATCAGATGTCAAGAAAATGACCAACAGCTTTGAAGTTAAACTAGGACAAGGTGGTTTTGGTGCTGTGTACAAAGGAAAGTTACCAAATGGTAGTCCTGTGGCCGTAAAGATGTTGAATGCATCGAAAAAAAATGGTGAAGAATTTATCAATGAGGTTGCTAGCATCAGTAGAACTTCTCATGTTAATGTTGTCACTCTTCTTGGGTTCTGTTTGGAAGGCCAAAAGAGAGCTCTCATCTATGAATTTATGCCCAATGGTTCCCTTGACAAGTTCATTTATAGAAAAGGACCTGAAATCATTACACCTTTGAGTTGGGATATTATATATCAAATTGCAATGGGTATAGCTAGAGGACTAGAGTACTTGCATAGAGGATGCAATACTAGAATTTTACATTTTGACATAAAACCACATAACATTCTTTTGGATGAAAATTTCTGCCCCAAGATATCAGATTTTGGGCTAGCAAAGCTTTGCCCTAGAAATGAAAGCATTATTTCCATGTCAGATGCTAGAGGAACAATGGGGTATGTAGCTCCTGAAGTGTTGAATAGACATTTTGCAAGAGTTTCACACAAGTGTGATGTTTATAGCTATGGAATGATGATGCTAGAAATGGTGGGAGGGAGAAAGAATATTAACGCTGAAGCAACTCAAACAAGTGAGATATTCTTCCCACATTTGGTATACAAGAGGCTTGAGTTGGGCAATGATTTGAGACTAGATGAGGTGATGACCATAGAAGAAAATGAGATTGCAAAGAGAATGACCATAGTGGGTTTATGGTGCATTCAAACATTTCCAAATGATAGACCTACAATGAGTAGAGTGATTGACATGTTGGAAGGTAGCATGAATTCCCTAGAAATGCCACCAAAACCTCTGTTTTCATCTCCTACTAGATCAGCACCGGAATCTTCCACCTCTTGA 1062 0.3776 MYLSANRYKSSAWQGNFGLTTKSNQHIEAFLKNHGALTLKRYKLSDVKKMTNSFEVKLGQGGFGAVYKGKLPNGSPVAVKMLNASKKNGEEFINEVASISRTSHVNVVTLLGFCLEGQKRALIYEFMPNGSLDKFIYRKGPEIITPLSWDIIYQIAMGIARGLEYLHRGCNTRILHFDIKPHNILLDENFCPKISDFGLAKLCPRNESIISMSDARGTMGYVAPEVLNRHFARVSHKCDVYSYGMMMLEMVGGRKNINAEATQTSEIFFPHLVYKRLELGNDLRLDEVMTIEENEIAKRMTIVGLWCIQTFPNDRPTMSRVIDMLEGSMNSLEMPPKPLFSSPTRSAPESSTS* 354
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr6g1047 353 ProSiteProfiles Protein kinase domain profile. 52 340 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr6g1047 353 SMART serkin_6 52 311 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr6g1047 353 Gene3D Transferase(Phosphotransferase) domain 1 127 339 - -
Apr6g1047 353 PIRSF ILK 13 335 - -
Apr6g1047 353 ProSitePatterns Protein kinases ATP-binding region signature. 58 80 IPR017441 GO:0005524
Apr6g1047 353 MobiDBLite consensus disorder prediction 333 353 - -
Apr6g1047 353 SUPERFAMILY Protein kinase-like (PK-like) 37 326 IPR011009 -
Apr6g1047 353 PANTHER MALECTIN/RECEPTOR-LIKE KINASE FAMILY PROTEIN 8 353 - -
Apr6g1047 353 CDD STKc_IRAK 58 327 - -
Apr6g1047 353 PANTHER RUST RESISTANCE KINASE LR10-RELATED 8 353 IPR045874 GO:0004672
Apr6g1047 353 Pfam Protein kinase domain 55 322 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr6g1047 353 Gene3D Phosphorylase Kinase; domain 1 16 126 - -
Apr6g1047 353 ProSitePatterns Serine/Threonine protein kinases active-site signature. 174 186 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr6g1047 Apr-Chr6 15159484 15160603 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr6g1047 24 340 Receptor kinase-like Gene Family AT4G18250 57.538 3.59e-128 381
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRK10L-2 Apr6g1047 Pkinase 6.4e-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr6g1047 - - gmx:100798745 585.489
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr6g1047 6 15159484 15160603 Apr2g1469 2 20722641 20730763 PCT