Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr6g1045 ATGACAGCAATATTGATATGCATTATAATTTATTTTAGATACAAGTCAATAGCATTGCAAGTGAAATTTTGTTTGACCACAAAGAGTGATCTACATATTGAAGCATTCTTAAAAGAGCATGGAGCTCTAGCACAGAAAAGATACAAACTTTCAGAAGTAAAGAAAATGACCAATTCCTTCAGAGATAAACTGGGTCAAGGTGGTTTTGGTGCCGTATATAAAGGAAAGCTACCCACTGGTTACCCTGTGGCTGTAAAATTGTTGAAATCATCCAAAGGAAATGGTGAAGAATTTATCAATGAGGTTGCTAGCATTAGTAGGACTTCTCATGTTAATGTTGTCACCCTTCTTGGATTTTGTTTGGAAGCCCAGAAGAAAGCTCTCATCTATGAGTTTATGGCCAATGGTTCCCTTGATAAGTACATTTACAATAAAAGGCCTGAAACCATTGCATCTTTGAGCTGGGAGAAGTTGTATCAAATTGCAATAGGAATAGCTCATGGTTTGGAGTACTTGCATAGGGGATGCAAAACTCGAATTTTACATTTTGACATAAAACCACATAATATTCTTTTGGATGAGAATTTCTGCCCCAAAATATCAGATTTTGGGCTAGCAAAGCTCTGTCCAAGGAAAGAGAGCATTATCTCCATGTCAGATGCTAGAGGGACAATGGGATATGTAGCTCCAGAAATGTGCAATAGACATTTTGGTGGAGTTTCACATAAGTCTGATGTTTATAGCTATGGAATGATGCTGCTAGAAATGGTGGGAGGGAGGAAGAATATTAATGCTGAAGCAAGTCAAACAAGTGAGATATTCTTCCCACATTTGGTATACAAGAGGCTTGAGTTGGACAATGATATAAGACCAGATGAGGTGATGACCATAGAAGAAAATGAGATTGCAAAGAAAATGACCATAGTGGGTTTATGGTGCATTCAAACATTTCCAAATGACAGGCCTACAATGAGTAGAGTGGTAGATATGTTGGAAGGCAGCATGAATTCCTTGGAAATTCCACCAAAACCTTTGCTTTCTTCTCCTACTAGAACGGGAACAGAGTCTTCCTCTTCTAATTAA 1083 0.3786 MTAILICIIIYFRYKSIALQVKFCLTTKSDLHIEAFLKEHGALAQKRYKLSEVKKMTNSFRDKLGQGGFGAVYKGKLPTGYPVAVKLLKSSKGNGEEFINEVASISRTSHVNVVTLLGFCLEAQKKALIYEFMANGSLDKYIYNKRPETIASLSWEKLYQIAIGIAHGLEYLHRGCKTRILHFDIKPHNILLDENFCPKISDFGLAKLCPRKESIISMSDARGTMGYVAPEMCNRHFGGVSHKSDVYSYGMMLLEMVGGRKNINAEASQTSEIFFPHLVYKRLELDNDIRPDEVMTIEENEIAKKMTIVGLWCIQTFPNDRPTMSRVVDMLEGSMNSLEIPPKPLLSSPTRTGTESSSSN* 361
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr6g1045 360 PANTHER MALECTIN/RECEPTOR-LIKE KINASE FAMILY PROTEIN 1 359 - -
Apr6g1045 360 SUPERFAMILY Protein kinase-like (PK-like) 46 332 IPR011009 -
Apr6g1045 360 ProSitePatterns Serine/Threonine protein kinases active-site signature. 180 192 IPR008271 GO:0004672|GO:0006468
Apr6g1045 360 Gene3D Phosphorylase Kinase; domain 1 23 132 - -
Apr6g1045 360 PANTHER RUST RESISTANCE KINASE LR10-RELATED 1 359 IPR045874 GO:0004672
Apr6g1045 360 ProSitePatterns Protein kinases ATP-binding region signature. 64 86 IPR017441 GO:0005524
Apr6g1045 360 CDD STKc_IRAK 64 333 - -
Apr6g1045 360 SMART serkin_6 58 331 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr6g1045 360 Pfam Protein kinase domain 62 328 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr6g1045 360 ProSiteProfiles Protein kinase domain profile. 58 346 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr6g1045 360 Gene3D Transferase(Phosphotransferase) domain 1 133 340 - -
Apr6g1045 360 MobiDBLite consensus disorder prediction 341 360 - -
Apr6g1045 360 MobiDBLite consensus disorder prediction 339 360 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr6g1045 Apr-Chr6 15148426 15149508 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr6g1045 46 352 Receptor kinase-like Gene Family AT5G38280 60.450 4.79e-129 383
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRK10L-2 Apr6g1045 Pkinase 2.5e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr6g1045 - - gmx:100800335 613.609